RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PPP1R3CQ9UQK1 317 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 CACNG2Q9Y698 323 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 TACC2O95359 2948 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 IGKV1-27A0A075B6S5 117 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 IGHV1-69-2A0A0G2JMI3 117 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 CCDC160A6NGH7 325 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 J3QT63 122 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 GABARAPO95166 117 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 IGHV4-39P01824 125 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 DAOP14920 347 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 FGF9P31371 208 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-227ENST00000498056 TGFBR1P36897 503 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 EFNA4P52798 201 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 ATP1B3P54709 279 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 MPPED2Q15777 294 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 SLC16A12Q6ZSM3 486 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 BATF2Q8N1L9 274 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 CELF2-AS1Q8N7Q2 184 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 OR11L1Q8NGX0 322 aa11.48□□□□□ -0.57
CPNE1-227ENST00000498056 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-227ENST00000498056 LYNX1G3V0Z9 82 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 SSX4O60224 188 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 LYNX1P0DP58 116 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 IRF2P14316 349 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 SRMP19623 302 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF93P35789 620 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 RBMXP38159 391 aaKnown RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 GMFBP60983 142 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 NCS1P62166 190 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 MXD1Q05195 221 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 BLMHQ13867 455 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 KISS1Q15726 138 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF826PQ6ZT77 177 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 LRRTM1Q86UE6 522 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 ANGPTL5Q86XS5 388 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 CALHM1Q8IU99 346 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 TGIF2LYQ8IUE0 185 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 BOLLQ8N9W6 283 aaKnown RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 NINJ1Q92982 152 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 BARX1Q9HBU1 254 aaPredicted RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 SNTG1Q9NSN8 517 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
CPNE1-227ENST00000498056 CSMD2Q7Z408 3487 aa11.47□□□□□ -0.57
CPNE1-227ENST00000498056 SHISA3A0PJX4 238 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 CDIPTO14735 213 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 PDCD5O14737 125 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-227ENST00000498056 ALX3O95076 343 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 CYB5R3P00387 301 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-227ENST00000498056 ADRA2CP18825 462 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 GATA4P43694 442 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 OR3A4PP47883 348 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 MTNR1BP49286 362 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 VBP1P61758 197 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 HFEQ30201 348 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 GDPGP1Q6ZNW5 385 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 SLC25A26Q70HW3 274 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 ANKRD13BQ86YJ7 626 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF525Q8N782 197 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 LRRC29Q8WV35 223 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 TNFAIP8L1Q8WVP5 186 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 CCL17Q92583 94 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 RDH5Q92781 318 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 HPS1Q92902 700 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 YIPF5Q969M3 257 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 SLAMF9Q96A28 289 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 OR51I2Q9H344 312 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 METTL17Q9H7H0 456 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-227ENST00000498056 DCAF16Q9NXF7 216 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
CPNE1-227ENST00000498056 AK6Q9Y3D8 172 aaKnown RBP11.46□□□□□ -0.57
CPNE1-227ENST00000498056 TRAV1-2A0A0B4J238 106 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 CLDN25C9JDP6 229 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 SYNGR1O43759 233 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 RHBDL1O75783 438 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 CDRT1O95170 752 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 PTBP3O95758 552 aaKnown RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 CYB5AP00167 134 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 TMEM225BP0DP42 221 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 RAB3BP20337 219 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 CD80P33681 288 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 SDC2P34741 201 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 SERPINB10P48595 397 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 OR10A3P58181 314 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 HOXA4Q00056 320 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-227ENST00000498056 GLT8D1Q68CQ7 371 aa11.45□□□□□ -0.58
CPNE1-227ENST00000498056 AWAT2Q6E213 333 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms