RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 DLSTP36957 453 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 ARPC4P59998 168 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 PSG4Q00888 419 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 FOXO1Q12778 655 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 RSU1Q15404 277 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 SURF2Q15527 256 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-208ENST00000496116 NRN1LQ496H8 165 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 ABHD17BQ5VST6 288 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 PLXDC2Q6UX71 529 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 LHFPL2Q6ZUX7 228 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 PEG10Q86TG7 708 aaKnown RBP9.66□□□□□ -0.86
CMSS1-208ENST00000496116 LHFPL1Q86WI0 220 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 SUN5Q8TC36 379 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM45BQ96B21 275 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 BORCS8Q96FH0 119 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 VRK1Q99986 396 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-208ENST00000496116 NMES1Q9C002 83 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 OR2H1Q9GZK4 316 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 SLC25A32Q9H2D1 315 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 PPA2Q9H2U2 334 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 GPR35Q9HC97 309 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF701Q9NV72 531 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-208ENST00000496116 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 CNTRLQ7Z7A1 2325 aa9.66□□□□□ -0.86
CMSS1-208ENST00000496116 A0A0B4J2A0 478 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 FAM230AA0A1W2PPH8 454 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 PINLYPA6NC86 204 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 EEF1E1-BLOC1S5C9J1V9 151 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 BCL2L11O43521 198 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SFT2D2O95562 160 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 F10P00742 488 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SERPINA5P05154 406 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 ECI1P42126 302 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 RBP2P50120 134 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 KRTAP27-1Q3LI81 207 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 OVCH2Q7RTZ1 564 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 DTX1Q86Y01 620 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 AKR7LQ8NHP1 331 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 ABHD3Q8WU67 409 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 Q96M66 194 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SHPKQ9UHJ6 478 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 DOCK10Q96BY6 2186 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 MFSD2BA6NFX1 497 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 MRPL33O75394 65 aaKnown RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 HTR3BO95264 441 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 NRASP01111 189 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SP9P0CG40 484 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF250P15622 560 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 PSMB6P28072 239 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SERPINF1P36955 418 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 NSUN5P2Q63ZY6 315 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 CLEC18BQ6UXF7 455 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF100Q8IYN0 542 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 OR2M7Q8NG81 312 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 OR13G1Q8NGZ3 307 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 EMG1Q92979 244 aaKnown RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF845Q96IR2 970 aaPredicted RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 CXorf58Q96LI9 332 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 RAB18Q9NP72 206 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 EDARQ9UNE0 448 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 OSGIN2Q9Y236 505 aa9.65□□□□□ -0.86
CMSS1-208ENST00000496116 NOSIPQ9Y314 301 aaKnown RBP9.65□□□□□ -0.86
CMSS1-208ENST00000496116 RTTNQ86VV8 2226 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 FRYLO94915 3013 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 COL6A3P12111 3177 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 XRCC2O43543 280 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 NEURL1O76050 574 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 RLN2P04090 185 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 CRHP06850 196 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PATE4P0C8F1 98 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 HGFACQ04756 655 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 ATXN7L3Q14CW9 347 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PLEKHN1Q494U1 663 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 NKAPLQ5M9Q1 402 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 AADACL3Q5VUY0 350 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 C6orf201Q7Z4U5 140 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 TMEM230Q96A57 120 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PHYHIPLQ96FC7 376 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 TECTBQ96PL2 329 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 DHRS9Q9BPW9 319 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 WNT5BQ9H1J7 359 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PARPBPQ9NWS1 579 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 SLC7A11Q9UPY5 501 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
CMSS1-208ENST00000496116 PCSK5Q92824 1860 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 IGKV3D-15A0A087WSY6 115 aa9.64□□□□□ -0.87
CMSS1-208ENST00000496116 RNF222A6NCQ9 220 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms