RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 FZR1Q9UM11 496 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 CMAHPQ9Y471 501 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 ZNF879B4DU55 563 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 B9A039 149 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 GABRPO00591 440 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 TIMM8AO60220 97 aaPredicted RBP10.32□□□□□ -0.76
UPF3A-210ENST00000493727 IGLV3-1P01715 115 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 CCL1P22362 96 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 THBS4P35443 961 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 SERPINF1P36955 418 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 FAM3AP98173 230 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 FABP5Q01469 135 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 RIPPLY1Q0D2K3 151 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 OR2T2Q6IF00 324 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 FBXW12Q6X9E4 464 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 FTMTQ8N4E7 242 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 OR56B2PQ8NGI1 322 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 SYNPRQ8TBG9 265 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 KLF14Q8TD94 323 aaPredicted RBP10.32□□□□□ -0.76
UPF3A-210ENST00000493727 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 SPSB4Q96A44 273 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 CMBLQ96DG6 245 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 SOX7Q9BT81 388 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 OR51E2Q9H255 320 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 CA10Q9NS85 328 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 CKLFQ9UBR5 152 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 GPR160Q9UJ42 338 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
UPF3A-210ENST00000493727 TRBV5-5A0A0J9YX44 114 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 ZNF816-ZNF321PA0A0X1KG74 233 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 TRDV1A0A1B0GX56 115 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 A0A1W2PPK0 400 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 A0A1W2PPW3 197 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 LOC390937A0A1W2PQ73 354 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 CD300LBA8K4G0 201 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 GATBO75879 557 aaKnown RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 ERCC1P07992 297 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 OCMP0CE72 109 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 FAHP16930 419 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MYL9P24844 172 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 THBS2P35442 1172 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MPV17P39210 176 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MAGEB1P43366 347 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 KLF3P57682 345 aaPredicted RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 RPS11P62280 158 aaKnown RBP eCLIP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 INSL4Q14641 139 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 EFNB3Q15768 340 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MST1LQ2TV78 715 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 ZMAT1Q5H9K5 638 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MBNL2Q5VZF2 373 aaKnown RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 BHLHE23Q8NDY6 225 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 CSNK2A3Q8NEV1 391 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 OR14K1Q8NGZ2 314 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 FGGYQ96C11 551 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 MARS2Q96GW9 593 aaKnown RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 JMJD8Q96S16 334 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 SYT3Q9BQG1 590 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 PAPOLGQ9BWT3 736 aaKnown RBP10.31□□□□□ -0.76
UPF3A-210ENST00000493727 SHARPINQ9H0F6 387 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 SLITRK2Q9H156 845 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 ZNF442Q9H7R0 627 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 NOX4Q9NPH5 578 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 ENPP5Q9UJA9 477 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 KCNS2Q9ULS6 477 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 V9GYS6 101 aa10.31□□□□□ -0.76
UPF3A-210ENST00000493727 SMIM31A0A1B0GVY4 71 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 A6NIN4 97 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 VWC2LB2RUY7 222 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 LMX1BO60663 402 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 GPX5O75715 221 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 ARL6IP5O75915 188 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 HNF1AP20823 631 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 GALP22466 123 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 DDOSTP39656 456 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 CRYBB2P43320 205 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PPOXP50336 477 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PPP3R1P63098 170 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PSG7Q13046 419 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 OR8B8Q15620 311 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 MOGQ16653 247 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 GDPGP1Q6ZNW5 385 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 ANKRD13BQ86YJ7 626 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 RPL3LQ92901 407 aaKnown RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 C10orf35Q96D05 121 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 ADAT3Q96EY9 351 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 SORCS2Q96PQ0 1159 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 DERL3Q96Q80 235 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms