RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PDCD5O14737 125 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 MLNRO43193 412 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 TPD52L2O43399 206 aaKnown RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 LY6HO94772 140 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 CDRT1O95170 752 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 IGFBP3P17936 291 aaPredicted RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 PRKACBP22694 351 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 TNFSF4P23510 183 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 AZGP1P25311 298 aaKnown RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 BDKRB2P30411 391 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 PPOXP50336 477 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 MXD1Q05195 221 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 MZT1Q08AG7 82 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 MST1LQ2TV78 715 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 CEACAM21Q3KPI0 293 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 DDI2Q5TDH0 399 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 ASPHD2Q6ICH7 369 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 OR5P3Q8WZ94 311 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 ISOC1Q96CN7 298 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 BORCS8Q96FH0 119 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 RTL8AQ9BWD3 113 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 TPK1Q9H3S4 243 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
MSH6-208ENST00000493177 RSL24D1Q9UHA3 163 aaKnown RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 AK6Q9Y3D8 172 aaKnown RBP11.39□□□□□ -0.59
MSH6-208ENST00000493177 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 FLNAP21333 2647 aaKnown RBP11.38□□□□□ -0.59
MSH6-208ENST00000493177 TRAV1-2A0A0B4J238 106 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 IGHV3-64DA0A0J9YX35 117 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 SMIM30A4D0T7 59 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 C17orf100A8MU93 164 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 ZNF732B4DXR9 585 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 F5H5P2 479 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 SDC2P34741 201 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 MTNR1BP49286 362 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 GPM6AP51674 278 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 FUT6P51993 359 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 ATP1B3P54709 279 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
MSH6-208ENST00000493177 CTF1Q16619 201 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 OR52N4Q8NGI2 321 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 ZNF420Q8TAQ5 688 aaPredicted RBP11.38□□□□□ -0.59
MSH6-208ENST00000493177 HPSE2Q8WWQ2 592 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 SPACA5Q96QH8 159 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 DIRC2Q96SL1 478 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 GPER1Q99527 375 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 MYOZ1Q9NP98 299 aaPredicted RBP11.38□□□□□ -0.59
MSH6-208ENST00000493177 TMEM138Q9NPI0 162 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 BATF3Q9NR55 127 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 ZDHHC8Q9ULC8 765 aa11.38□□□□□ -0.59
MSH6-208ENST00000493177 CHD3Q12873 2000 aaKnown RBP11.38□□□□□ -0.59
MSH6-208ENST00000493177 SHISA3A0PJX4 238 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 MEGF11A6BM72 1044 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 OR5B21A6NL26 309 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 ALX3O95076 343 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 GRPP07492 148 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 CLEC2LP0C7M8 214 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 RAB3BP20337 219 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 THBS2P35442 1172 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 SRP9P49458 86 aaKnown RBP11.37□□□□□ -0.59
MSH6-208ENST00000493177 RBP2P50120 134 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 MTCP1P56278 107 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 GNG3P63215 75 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 GLT8D1Q68CQ7 371 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 ZNF529Q6P280 563 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 DNM1P46Q6ZS02 220 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 LHFPL2Q6ZUX7 228 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 LRRTM1Q86UE6 522 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 ZCCHC24Q8N2G6 241 aaKnown RBP11.37□□□□□ -0.59
MSH6-208ENST00000493177 JAGN1Q8N5M9 183 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 NKAIN3Q8N8D7 197 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 C10orf105Q8TEF2 133 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 RFT1Q96AA3 541 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 C12orf43Q96C57 262 aaKnown RBP11.37□□□□□ -0.59
MSH6-208ENST00000493177 CPNE2Q96FN4 548 aaPredicted RBP11.37□□□□□ -0.59
MSH6-208ENST00000493177 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
MSH6-208ENST00000493177 DECR2Q9NUI1 292 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 ACANP16112 2415 aa11.37□□□□□ -0.59
MSH6-208ENST00000493177 TMEM210A6NLX4 147 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 H3BMQ9 156 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 NDUFS8O00217 210 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 SLC22A1O15245 554 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 NCR1O76036 304 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 PLATP00750 562 aa11.36□□□□□ -0.59
MSH6-208ENST00000493177 ALDOBP05062 364 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms