RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SLC25A12O75746 678 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 KDM4BO94953 1096 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SIX6O95475 246 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DDAH2O95865 285 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PNPP00491 289 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CST4P01036 141 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IFNA21P01568 189 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IGKV1D-16P01601 117 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MT-ND4LP03901 98 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CD3DP04234 171 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CRYBA1P05813 215 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CD5P06127 495 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FCGR3AP08637 254 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 H2BFMP0C1H6 154 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CT62P0C5K7 136 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR8G3PP0DMU2 310 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GP1BBP13224 206 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FOLR2P14207 255 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GLULP15104 373 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ABOP16442 354 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CEBPBP17676 345 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MAOAP21397 527 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ACHEP22303 614 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 HNRNPA2B1P22626 353 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 S100PP25815 95 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ABCD3P28288 659 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CD34P28906 385 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 BDKRB2P30411 391 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 AVPR2P30518 371 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 AKT2P31751 481 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MAS1LP35410 378 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GNALP38405 381 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RFC3P40938 356 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 NAA10P41227 235 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ACTR1BP42025 376 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GUCA1AP43080 201 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ALDH3B1P43353 468 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MAGEB1P43366 347 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR3A2P47893 321 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DNASE1L1P49184 302 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RAB5CP51148 216 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RAB13P51153 203 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CAV2P51636 162 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CCR5P51681 352 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 POLR2HP52434 150 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DVL1P1P54792 670 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 UCP2P55851 309 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CLDN12P56749 244 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CLDN2P57739 230 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CD81P60033 236 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ACTR1AP61163 376 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 UBE2IP63279 158 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 QRFPP83859 136 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SORDQ00796 357 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GLO1Q04760 184 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RPL18Q07020 188 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IL15RAQ13261 267 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DHRS2Q13268 280 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 EIF3IQ13347 325 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GPM6BQ13491 265 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SMCO1Q147U7 214 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SURF2Q15527 256 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SGCBQ16585 318 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SGCAQ16586 387 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MEP1BQ16820 701 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 C2orf68Q2NKX9 166 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ACTBL2Q562R1 376 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RNASE10Q5GAN6 216 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 LY6G6FQ5SQ64 297 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SHEQ5VZ18 495 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 TMEM225Q6GV28 225 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR7E24Q6IFN5 339 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 H3F3CQ6NXT2 135 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PRSS54Q6PEW0 395 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 HAGHLQ6PII5 290 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DNM1P34Q6PK57 102 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DHRS11Q6UWP2 260 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IL20RBQ6UXL0 311 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 NHLRC1Q6VVB1 395 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IL34Q6ZMJ4 242 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DGAT2L6Q6ZPD8 337 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CFAP77Q6ZQR2 320 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 Q6ZSR6 202 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR2W3Q7Z3T1 314 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 NAA40Q86UY6 237 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PARGQ86W56 976 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 HOGA1Q86XE5 327 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CACUL1Q86Y37 369 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 LYPD6Q86Y78 171 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ZNF584Q8IVC4 421 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MISPQ8IVT2 679 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SLC22A24Q8N4F4 322 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ARRDC1Q8N5I2 433 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CSNK1A1LQ8N752 337 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FRMD1Q8N878 549 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ZNF614Q8N883 585 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 NKAIN3Q8N8D7 197 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 C15orf54Q8N8G6 183 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CHST4Q8NCG5 386 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 STEAP2Q8NFT2 490 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms