RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ZNF295-AS1Q8N0V1 137 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 PNLDC1Q8NA58 520 aaKnown RBP11.35□□□□□ -0.59
TRAIP-210ENST00000489948 GTF3AQ92664 365 aaKnown RBP11.35□□□□□ -0.59
TRAIP-210ENST00000489948 DVL3Q92997 716 aaPredicted RBP11.35□□□□□ -0.59
TRAIP-210ENST00000489948 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
TRAIP-210ENST00000489948 ELMOD3Q96FG2 381 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 SORCS2Q96PQ0 1159 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 MRI1Q9BV20 369 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 PKIBQ9C010 78 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 DYNLRB1Q9NP97 96 aa11.35□□□□□ -0.59
TRAIP-210ENST00000489948 AK6Q9Y3D8 172 aaKnown RBP11.35□□□□□ -0.59
TRAIP-210ENST00000489948 IGKV1-27A0A075B6S5 117 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 ZNF732B4DXR9 585 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 H0YL77 283 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 H7C417 338 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 J3QT63 122 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 CD8AP01732 235 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 SOD3P08294 240 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 CLEC2LP0C7M8 214 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 BMP4P12644 408 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 SRP9P49458 86 aaKnown RBP11.34□□□□□ -0.59
TRAIP-210ENST00000489948 GPM6AP51674 278 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 MTCP1P56278 107 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 ZNF154Q13106 437 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 HNRNPA0Q13151 305 aaKnown RBP11.34□□□□□ -0.59
TRAIP-210ENST00000489948 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 SAXO1Q8IYX7 474 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 ZSCAN4Q8NAM6 433 aaPredicted RBP11.34□□□□□ -0.59
TRAIP-210ENST00000489948 OR2Z1Q8NG97 314 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 TRMT10AQ8TBZ6 339 aaKnown RBP11.34□□□□□ -0.59
TRAIP-210ENST00000489948 NPRL2Q8WTW4 380 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 ERGIC1Q969X5 290 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 RNF170Q96K19 258 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 MEGF10Q96KG7 1140 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 OR51I2Q9H344 312 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 UBTD1Q9HAC8 227 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 GHRLQ9UBU3 117 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 DSCAMO60469 2012 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 CACNA1DQ01668 2161 aa11.34□□□□□ -0.59
TRAIP-210ENST00000489948 LOC100289279A0A1B0GTE1 492 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 FAM230AA0A1W2PPH8 454 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 F5H5P2 479 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 NCR1O76036 304 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 UBBP0CG47 229 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 NAT2P11245 290 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 HTR2CP28335 458 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 SOX6P35712 828 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 RORCP51449 518 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 IL24Q13007 206 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 MAB21L1Q13394 359 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 TMEM200AQ86VY9 491 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 JAGN1Q8N5M9 183 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 PXT1Q8NFP0 134 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 Q8TCH9 128 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 AP3S1Q92572 193 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 OR2V2Q96R30 315 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 SLIRPQ9GZT3 109 aaKnown RBP11.33□□□□□ -0.6
TRAIP-210ENST00000489948 CNTD2Q9H8S5 307 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 A3GALT2U3KPV4 340 aa11.33□□□□□ -0.6
TRAIP-210ENST00000489948 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
TRAIP-210ENST00000489948 SPRY3O43610 288 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ACAA1P09110 424 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-210ENST00000489948 CALCBP10092 127 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-210ENST00000489948 TNFRSF1AP19438 455 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 CFHR2P36980 270 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 PTGFRP43088 359 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 HAAOP46952 286 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 CAV3P56539 151 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-210ENST00000489948 PDZK1IP1Q13113 114 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 RAB11BQ15907 218 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ZNF181Q2M3W8 571 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ASCL4Q6XD76 172 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 OR4D6Q8NGJ1 314 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 TBC1D15Q8TC07 691 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ACOT12Q8WYK0 555 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-210ENST00000489948 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 GPER1Q99527 375 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 EGLN1Q9GZT9 426 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 NXF2Q9GZY0 626 aaKnown RBP11.32□□□□□ -0.6
TRAIP-210ENST00000489948 TPK1Q9H3S4 243 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 RHOFQ9HBH0 211 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 PLGRKTQ9HBL7 147 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 PTTG2Q9NZH5 202 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 POLDIP2Q9Y2S7 368 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
TRAIP-210ENST00000489948 APCP25054 2843 aa11.31□□□□□ -0.6
TRAIP-210ENST00000489948 SMIM30A4D0T7 59 aa11.31□□□□□ -0.6
TRAIP-210ENST00000489948 OVOL3O00110 214 aa11.31□□□□□ -0.6
TRAIP-210ENST00000489948 ZNF780AO75290 641 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms