RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 INAFM2P0DMQ5 153 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 HLA-DMAP28067 261 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 MPIP34949 423 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 GRB2P62993 217 aaKnown RBP1.28□□□□□ -2.2
CCDC66-221ENST00000487739 SLC35A1P78382 337 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 RPL18AQ02543 176 aaKnown RBP1.28□□□□□ -2.2
CCDC66-221ENST00000487739 PLCXD3Q63HM9 321 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 WDR59Q6PJI9 974 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 ANGPTL8Q6UXH0 198 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 DAW1Q8N136 415 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 BBOF1Q8ND07 529 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 OR2M7Q8NG81 312 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 OR1S1Q8NH92 325 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 AGR3Q8TD06 166 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 SFXN5Q8TD22 340 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 GPX8Q8TED1 209 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 GLYATL2Q8WU03 294 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 PIH1D2Q8WWB5 315 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 RBPMSQ93062 196 aaKnown RBP1.28□□□□□ -2.2
CCDC66-221ENST00000487739 YIPF6Q96EC8 236 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 SNF8Q96H20 258 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 CSPG4P5Q96PW8 444 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 DERL3Q96Q80 235 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 STACQ99469 402 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 TBL1XR1Q9BZK7 514 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 IQCGQ9H095 443 aaKnown RBP1.28□□□□□ -2.2
CCDC66-221ENST00000487739 CLSTN2Q9H4D0 955 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 VSIRQ9H7M9 311 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 VAX2Q9UIW0 290 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 RHBDD3Q9Y3P4 386 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 ENPP4Q9Y6X5 453 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 R4GN34 69 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 WDR19Q8NEZ3 1342 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 NUP205Q92621 2012 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 LTBP2Q14767 1821 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ELP1O95163 1332 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 TTC41PQ6P2S7 1318 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 TRAV8-6A0A0B4J262 113 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 A0A0G2JMP0 313 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 A0A0X1KG70 313 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 GOLGA8JA6NMD2 632 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 HMMRO75330 724 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 SMC2O95347 1197 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 LCA5LO95447 670 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 OR5AC1P0C628 307 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 GOLGA8HP0CJ92 632 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 GFAPP14136 432 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 PMCHP20382 165 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 GABRR2P28476 465 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 PRSS3P35030 304 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ARL2P36404 184 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 CLDN6P56747 220 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 MTPNP58546 118 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 YWHAEP62258 255 aaKnown RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 RAB11AP62491 216 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 LCN2P80188 198 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 FMODQ06828 376 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 SLC9A3R2Q15599 337 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 RAB11BQ15907 218 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 TPRG1LQ5T0D9 272 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 PIP5KL1Q5T9C9 394 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 MLIPQ5VWP3 458 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ITPRIPQ8IWB1 547 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 CYB561A3Q8NBI2 242 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 OR4D6Q8NGJ1 314 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 BAALCQ8WXS3 180 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 NAT6Q93015 286 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ISG20Q96AZ6 181 aaKnown RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ZNF707Q96C28 371 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 FXYD5Q96DB9 178 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ZBED3Q96IU2 234 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 OR51B5Q9H339 312 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 TRIM45Q9H8W5 580 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 FANCEQ9HB96 536 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 ZNF302Q9NR11 478 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 STX18Q9P2W9 335 aaKnown RBP1.27□□□□□ -2.21
CCDC66-221ENST00000487739 HMGXB4Q9UGU5 601 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 SLC22A7Q9Y694 548 aa1.27□□□□□ -2.21
CCDC66-221ENST00000487739 IZUMO1RA6ND01 250 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 NCF1BA6NI72 391 aaPredicted RBP1.26□□□□□ -2.21
CCDC66-221ENST00000487739 NCF1CA8MVU1 366 aaPredicted RBP1.26□□□□□ -2.21
CCDC66-221ENST00000487739 J3QT63 122 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 TTC4O95801 387 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 SLC35G6P0C7Q6 338 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 STAG3L3P0CL85 134 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 PAX6P26367 422 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 GNRHRP30968 328 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 MAGEA1P43355 309 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 ACOT2P49753 483 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 RGS6P49758 472 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 OR12D2P58182 307 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 TAS2R39P59534 338 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 ATP5G2Q06055 141 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 MAPRE2Q15555 327 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 HIKESHIQ53FT3 197 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 LDLRAD2Q5SZI1 272 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 LIN9Q5TKA1 542 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 FAM104BQ5XKR9 115 aa1.26□□□□□ -2.21
CCDC66-221ENST00000487739 MRPL21Q7Z2W9 205 aaKnown RBP1.26□□□□□ -2.21
CCDC66-221ENST00000487739 TMCO2Q7Z6W1 182 aaPredicted RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms