RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 YEATS2Q9ULM3 1422 aa2.05□□□□□ -2.08
HMGB1P36-201ENST00000487709 ADGRL1O94910 1474 aa2.05□□□□□ -2.08
HMGB1P36-201ENST00000487709 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 A0A0G2JMP0 313 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 A0A0X1KG70 313 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 A0A1W2PPV4 95 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 MFNGO00587 321 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 SCELO95171 688 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 YEATS4O95619 227 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 SNAI1O95863 264 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 IGKV4-1P06312 121 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 KLK1P06870 262 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 RNASE2P10153 161 aaKnown RBP2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 CXCR1P25024 350 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ARR3P36575 388 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 MTPNP58546 118 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 PSMC5P62195 406 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 RPL18AQ02543 176 aaKnown RBP2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 INCA1Q0VD86 236 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ST3GAL4Q11206 333 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 TSC22D1Q15714 1073 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 STEAP4Q687X5 459 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ZFAND6Q6FIF0 208 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ERICH5Q6P6B1 374 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 GPR179Q6PRD1 2367 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 SLC7A5P1Q8MH63 180 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 FAM58AQ8N1B3 248 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 SLC35G3Q8N808 338 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 PHF10Q8WUB8 498 aaKnown RBP2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 WDR34Q96EX3 536 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 HMGXB4Q9UGU5 601 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 RAB22AQ9UL26 194 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 RAB23Q9ULC3 237 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 FLVCR2Q9UPI3 526 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 FARSAQ9Y285 508 aaKnown RBP2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ZNF257Q9Y2Q1 563 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 ENPP4Q9Y6X5 453 aa2.04□□□□□ -2.08
HMGB1P36-201ENST00000487709 MAP3K19Q56UN5 1328 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 IGKV2-24A0A0C4DH68 120 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 ERICH2A1L162 156 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 LINC01619G3V211 115 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 ZBTB5O15062 677 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TCAPO15273 167 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 E2F6O75461 281 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 ETHE1O95571 254 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 LHBP01229 141 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 SNRPAP09012 282 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 THRAP10827 490 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 HLA-GP17693 338 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TUBG1P23258 451 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 GDI2P50395 445 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 PAFAH1B2P68402 229 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 SLC35B1P78383 322 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 PRKCDQ05655 676 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TRMT10CQ7L0Y3 403 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 COMTD1Q86VU5 262 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 SPATA24Q86W54 205 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 SLC26A10Q8NG04 563 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 OR52N1Q8NH53 320 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 LRRC20Q8TCA0 184 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 ZFAND1Q8TCF1 268 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TMEM234Q8WY98 164 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 YIPF5Q969M3 257 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 FAM131CQ96AQ9 280 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TSNAXQ99598 290 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 NAPGQ99747 312 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 NAA50Q9GZZ1 169 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 ARV1Q9H2C2 271 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 FBXO44Q9H4M3 255 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 TUBG2Q9NRH3 451 aa2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 NOSIPQ9Y314 301 aaKnown RBP2.03□□□□□ -2.08
HMGB1P36-201ENST00000487709 AQRO60306 1485 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 TRAV8-6A0A0B4J262 113 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 A0A0B4J2E0 115 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 C9JQL5 133 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CCDC22O60826 627 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CBR3O75828 277 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 NTF3P20783 257 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 HLA-DMAP28067 261 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CSKP41240 450 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 MAP3K7CLP57077 242 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 RPS11P62280 158 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 ANGPT1Q15389 498 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 USF2Q15853 346 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CDNFQ49AH0 187 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 IDNKQ5T6J7 187 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CPTPQ5TA50 214 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 TMEM236Q5W0B7 351 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 PDPK2PQ6A1A2 396 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 C16orf47Q6ZP98 133 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 SGPP2Q8IWX5 399 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 DAW1Q8N136 415 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 ARHGAP18Q8N392 663 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 ASCC1Q8N9N2 400 aaKnown RBP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 CYB561A3Q8NBI2 242 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms