RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KRTAP27-1Q3LI81 207 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 AADACL3Q5VUY0 350 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 DBX2Q6ZNG2 339 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 OR2AE1Q8NHA4 323 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 SPSB1Q96BD6 273 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 REEP6Q96HR9 211 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 ALKBH3Q96Q83 286 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 NMES1Q9C002 83 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 SHPKQ9UHJ6 478 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 SDK2Q58EX2 2172 aa15.69■□□□□ 0.1
PDLIM7-207ENST00000486828 OR6C6A6NF89 314 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 A8MXK9 166 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 TRAPPC6AO75865 159 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF883P0CG24 379 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 CYB561P49447 251 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 BAMBIQ13145 260 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 CLEC18BQ6UXF7 455 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 GALNTL5Q7Z4T8 443 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 HSD17B13Q7Z5P4 300 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 SLC39A7Q92504 469 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 LINC00052Q96N35 136 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 CDC6Q99741 560 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 RTBDNQ9BSG5 229 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 P4HTMQ9NXG6 502 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 MBD2Q9UBB5 411 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 PCSK5Q92824 1860 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 C13orf42A0A1B0GVH6 325 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 PMS2P1A4D2B8 440 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 FGF2P09038 288 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 B4GALT1P15291 398 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF32P17041 273 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 GDF1P27539 372 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 PSMB6P28072 239 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 LUMP51884 338 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 MTCP1P56278 107 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 CYCSP99999 105 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 RIPPLY2Q5TAB7 128 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 NSUN5P2Q63ZY6 315 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 INO80EQ8NBZ0 244 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 RELL2Q8NC24 303 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 OR5AP2Q8NGF4 316 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 Q96M66 194 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 TAAR9Q96RI9 348 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 STRADBQ9C0K7 418 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 PPA2Q9H2U2 334 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 CHMP1AQ9HD42 196 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 RASL12Q9NYN1 266 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 EHFQ9NZC4 300 aa15.68■□□□□ 0.1
PDLIM7-207ENST00000486828 PINLYPA6NC86 204 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 SDCBPO00560 298 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 CLDN15P56746 228 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 SUPT4H1P63272 117 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 BEX5Q5H9J7 111 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 OVCH2Q7RTZ1 564 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 EIF4E3Q8N5X7 224 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 MAFIPQ8WZ33 124 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 PSMF1Q92530 271 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 PHYHIPLQ96FC7 376 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 CPNE2Q96FN4 548 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 FOXB1Q99853 325 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 METTL9Q9H1A3 318 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 RAB18Q9NP72 206 aa15.67■□□□□ 0.1
PDLIM7-207ENST00000486828 A0A1B0GW55 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 LNP1A1A4G5 178 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 KRBOX1C9JBD0 128 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 LCATP04180 440 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L2P0CJ85 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L3P0CJ86 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L4P0CJ87 422 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L5P0CJ88 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L6P0CJ89 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4L7P0CJ90 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 TMEM225BP0DP42 221 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CNR1P21554 472 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PRKACBP22694 351 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 NUP62P37198 522 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 NBL1P41271 181 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 HTR5AP47898 357 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CNN3Q15417 329 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 SLC9A3R2Q15599 337 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CHRFAM7AQ494W8 412 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 RAB11FIP2Q7L804 512 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 C6orf201Q7Z4U5 140 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 BVESQ8NE79 360 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PXT1Q8NFP0 134 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 AKR7LQ8NHP1 331 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CPNE4Q96A23 557 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 ZNF471Q9BX82 626 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 DUX4Q9UBX2 424 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 TIMM10BQ9Y5J6 103 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 TRBV6-7A0A0A0MS04 114 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CYTIPO60759 359 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 HTR3BO95264 441 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PI3P19957 117 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 GABRR1P24046 479 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 GFRA1P56159 465 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PSG4Q00888 419 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 SURF2Q15527 256 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 CEACAM16Q2WEN9 425 aa15.66■□□□□ 0.1
PDLIM7-207ENST00000486828 PLXDC2Q6UX71 529 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms