RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 ACRV1P26436 265 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 CST5P28325 142 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 HINT1P49773 126 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RAC3P60763 192 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RHOAP61586 193 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 BTN3A2P78410 334 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RBPJQ06330 500 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 AGERQ15109 404 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 PCK2Q16822 640 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 FBXL22Q6P050 247 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 GABRG3Q99928 467 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 MRPL13Q9BYD1 178 aaKnown RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 SLCO5A1Q9H2Y9 848 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 SIDT1Q9NXL6 827 aaKnown RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 C5AR2Q9P296 337 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 ICAM5Q9UMF0 924 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 YIPF1Q9Y548 306 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 LRP12Q9Y561 859 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RFNGQ9Y644 331 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 CACNA1CQ13936 2221 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF814B7Z6K7 855 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 SYNGR4O95473 234 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RAB38P57729 211 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 FZD2Q14332 565 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 EXOSC7Q15024 291 aaKnown RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM176BQ3YBM2 270 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM128Q5BJH2 165 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 IL22RA1Q8N6P7 574 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 VN1R17PQ8TDU5 208 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF48Q96MX3 618 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RASL10BQ96S79 203 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 NICN1Q9BSH3 213 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 C20orf141Q9NUB4 165 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 RYDENQ9NUL5 291 aaKnown RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF107Q9UII5 783 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-205ENST00000483338 PADI3Q9ULW8 664 aa6.92□□□□□ -1.3
COL4A5-205ENST00000483338 A0A1W2PS29 197 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 C4orf47A7E2U8 309 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 HRH1P35367 487 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ERVS71-1P61550 626 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SUPT4H1P63272 117 aaKnown RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ACTL10Q5JWF8 245 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR10AC1Q8NH08 325 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ADAMTS15Q8TE58 950 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ARRDC3Q96B67 414 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ARHGDIGQ99819 225 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM9BQ9NQ34 198 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 KIAA1456Q9P272 454 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 COLQQ9Y215 455 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 TRIP12Q14669 1992 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 IGLV3-10A0A075B6K4 115 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR5B21A6NL26 309 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 KCNE1P15382 129 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SELPP16109 830 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 P2RY1P47900 373 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 DUSP3P51452 185 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 PRDX4Q13162 271 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 LASP1Q14847 261 aaKnown RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF506Q5JVG8 444 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 C9orf50Q5SZB4 431 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF761Q86XN6 746 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF709Q8N972 641 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR4S2Q8NH73 311 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 PFN4Q8NHR9 129 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ZNRF4Q8WWF5 429 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR5P2Q8WZ92 322 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 CCDC74AQ96AQ1 378 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SLC41A2Q96JW4 573 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 TBX21Q9UL17 535 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 TRBV5-5A0A0J9YX44 114 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SPINT1O43278 529 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SFT2D2O95562 160 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 EFEMP2O95967 443 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 HOXD9P28356 352 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 IMPA1P29218 277 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 CTRLP40313 264 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 MAPK8P45983 427 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 SLAQ13239 276 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 FAM90A2PQ658T7 463 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 DPPA3Q6W0C5 159 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 Q6ZN92 141 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 TGIF2LYQ8IUE0 185 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 GJD3Q8N144 294 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 NECAP1Q8NC96 275 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR51A4Q8NGJ6 313 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 OR11L1Q8NGX0 322 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ZNF596Q8TC21 504 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 PRAP1Q96NZ9 151 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 BCL2L10Q9HD36 194 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ELOVL5Q9NYP7 299 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
COL4A5-205ENST00000483338 ADAM29Q9UKF5 820 aa6.91□□□□□ -1.3
COL4A5-205ENST00000483338 KIAA2026Q5HYC2 2103 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms