RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MDH2P40926 338 aaKnown RBP22.48■■□□□ 1.19
CCM2-211ENST00000478582 ZMYND11Q15326 602 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 PARP16Q8N5Y8 322 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 ZFP41Q8N8Y5 198 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 OR10Z1Q8NGY1 313 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 RPL3LQ92901 407 aaKnown RBP22.48■■□□□ 1.19
CCM2-211ENST00000478582 CCDC90BQ9GZT6 254 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 SLC7A11Q9UPY5 501 aa22.48■■□□□ 1.19
CCM2-211ENST00000478582 SONP18583 2426 aaKnown RBP22.48■■□□□ 1.19
CCM2-211ENST00000478582 PPIAL4EA0A075B759 164 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 PPIAL4DF5H284 164 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 PPIAL4FP0DN26 164 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 GZMKP49863 264 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 LMO4P61968 165 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 YIF1BQ5BJH7 314 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 ZNF573Q86YE8 665 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 MUC20Q8N307 709 aaPredicted RBP22.47■■□□□ 1.19
CCM2-211ENST00000478582 GCSAMQ8N6F7 178 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 C1orf159Q96HA4 380 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 TMEM165Q9HC07 324 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 PPIAL4AQ9Y536 164 aa22.47■■□□□ 1.19
CCM2-211ENST00000478582 ALX3O95076 343 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 CELP19835 753 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 FUT6P51993 359 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 CNN3Q15417 329 aaKnown RBP22.46■■□□□ 1.19
CCM2-211ENST00000478582 MED22Q15528 200 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 PRIMA1Q86XR5 153 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 SERPINA12Q8IW75 414 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 DNAAF1Q8NEP3 725 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 TSEN15Q8WW01 171 aaKnown RBP22.46■■□□□ 1.19
CCM2-211ENST00000478582 NARFLQ9H6Q4 476 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 ISYNA1Q9NPH2 558 aa22.46■■□□□ 1.19
CCM2-211ENST00000478582 IGKV1-9A0A0C4DH69 117 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 hCG_1807616A0A1W2PRN6 198 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 ISPDA4D126 451 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 ATF1P18846 271 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 IL2RGP31785 369 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 RPS11P62280 158 aaKnown RBP eCLIP22.45■■□□□ 1.18
CCM2-211ENST00000478582 GPR50Q13585 617 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 TBCEQ15813 527 aaPredicted RBP22.45■■□□□ 1.18
CCM2-211ENST00000478582 FAM201AQ5SY85 155 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 SPICQ8N5J4 248 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 OR5D14Q8NGL3 314 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 LRRC29Q8WV35 223 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 AQP3Q92482 292 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 ZCCHC4Q9H5U6 513 aa22.45■■□□□ 1.18
CCM2-211ENST00000478582 TRBV5-5A0A0J9YX44 114 aa22.44■■□□□ 1.18
CCM2-211ENST00000478582 ANK3Q12955 4377 aaKnown RBP22.44■■□□□ 1.18
CCM2-211ENST00000478582 ZNF404Q494X3 552 aa22.44■■□□□ 1.18
CCM2-211ENST00000478582 SPSB1Q96BD6 273 aa22.44■■□□□ 1.18
CCM2-211ENST00000478582 GAL3ST1Q99999 423 aa22.44■■□□□ 1.18
CCM2-211ENST00000478582 METTL17Q9H7H0 456 aaPredicted RBP22.44■■□□□ 1.18
CCM2-211ENST00000478582 SRRM5B3KS81 715 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 LGALS8O00214 317 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 ZNF205O95201 554 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 IGHV2-5P01817 119 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 CD2P06729 351 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 OCM2P0CE71 109 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 PRKACBP22694 351 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 CPT2P23786 658 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 MAP2K4P45985 399 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 HAAOP46952 286 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 TEX36Q5VZQ5 186 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 HAGHLQ6PII5 290 aaPredicted RBP22.43■■□□□ 1.18
CCM2-211ENST00000478582 ZNF671Q8TAW3 534 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 TRMT10AQ8TBZ6 339 aaKnown RBP22.43■■□□□ 1.18
CCM2-211ENST00000478582 RAB39BQ96DA2 213 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 ZNF665Q9H7R5 613 aa22.43■■□□□ 1.18
CCM2-211ENST00000478582 JMJD1CQ15652 2540 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 ABCA2Q9BZC7 2435 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 FAM230AA0A1W2PPH8 454 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 J3QT63 122 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 EGR1P18146 543 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 MPZP25189 248 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 AZGP1P25311 298 aaKnown RBP22.42■■□□□ 1.18
CCM2-211ENST00000478582 SOX2P48431 317 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 Q499Y3 187 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 ZNF529Q6P280 563 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 TMEM106AQ96A25 262 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 BORCS8Q96FH0 119 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 TMEM246Q9BRR3 403 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 PKIBQ9C010 78 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 PATZ1Q9HBE1 687 aaKnown RBP22.42■■□□□ 1.18
CCM2-211ENST00000478582 TMEM160Q9NX00 188 aa22.42■■□□□ 1.18
CCM2-211ENST00000478582 IGKV1-27A0A075B6S5 117 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 TRAV38-1A0A0B4J264 116 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 PNMA8CA0A1B0GUJ8 204 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 OOEPA6NGQ2 149 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 RHBDL1O75783 438 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 ACAA1P09110 424 aaPredicted RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 ZNF16P17020 682 aaPredicted RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 RBP2P50120 134 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 HOXA4Q00056 320 aaPredicted RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 EMX1Q04741 257 aaPredicted RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 MLLT11Q13015 90 aaPredicted RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 TPBGQ13641 420 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 KCNJ8Q15842 424 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 MS4A15Q8N5U1 240 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 BOLLQ8N9W6 283 aaKnown RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 OR13C5Q8NGS8 318 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms