RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 MAPK1IP1LQ8NDC0 245 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 OR51A4Q8NGJ6 313 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 OR10AC1Q8NH08 325 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 TSEN15Q8WW01 171 aaKnown RBP11.03□□□□□ -0.64
TOP3A-205ENST00000477508 ADAT3Q96EY9 351 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-205ENST00000477508 C1orf159Q96HA4 380 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 ISYNA1Q9NPH2 558 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 DCAF16Q9NXF7 216 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 UBAP1Q9NZ09 502 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 PCDHB10Q9UN67 800 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
TOP3A-205ENST00000477508 YLPM1P49750 1951 aaKnown RBP11.03□□□□□ -0.64
TOP3A-205ENST00000477508 ZANQ9Y493 2812 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 LGALS8O00214 317 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 LMX1BO60663 402 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 MT-ND2P03891 347 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 MUC1P15941 1255 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 ATF1P18846 271 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 CELP19835 753 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 RBP2P50120 134 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 LMO4P61968 165 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 MED22Q15528 200 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF826PQ6ZT77 177 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 SVOPQ8N4V2 548 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 LRRC29Q8WV35 223 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 RPL3LQ92901 407 aaKnown RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 BORCS8Q96FH0 119 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 CPNE2Q96FN4 548 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 FGF23Q9GZV9 251 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 ZCCHC4Q9H5U6 513 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 TMEM165Q9HC07 324 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 MIOXQ9UGB7 285 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 SIRT4Q9Y6E7 314 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-205ENST00000477508 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
TOP3A-205ENST00000477508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.656e-10■■■■□ 25.5
TOP3A-205ENST00000477508 OOEPA6NGQ2 149 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 B4DSR2 109 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 J3QT63 122 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 WNT9BO14905 357 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 CD5LO43866 347 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 LY6G6DO95868 133 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 IGHV2-5P01817 119 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 HAAOP46952 286 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 ATP1B3P54709 279 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 TBCEQ15813 527 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-205ENST00000477508 MICBQ29980 383 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF404Q494X3 552 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 HAGHLQ6PII5 290 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-205ENST00000477508 DCDC5Q6ZRR9 648 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 LHFPL2Q6ZUX7 228 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 NLRC3Q7RTR2 1065 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 GCSAMQ8N6F7 178 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 AQP3Q92482 292 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 SGCDQ92629 289 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
TOP3A-205ENST00000477508 PGLYRP3Q96LB9 341 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 PKIBQ9C010 78 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 NARFLQ9H6Q4 476 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
TOP3A-205ENST00000477508 RASL12Q9NYN1 266 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
TOP3A-205ENST00000477508 LRRC42Q9Y546 428 aa11.01□□□□□ -0.65
TOP3A-205ENST00000477508 FAM230AA0A1W2PPH8 454 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 MAGEB3O15480 346 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 SULT1B1O43704 296 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 NOS1APO75052 506 aaPredicted RBP11□□□□□ -0.65
TOP3A-205ENST00000477508 CYB5AP00167 134 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 PCMT1P22061 227 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 MPZP25189 248 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 AZGP1P25311 298 aaKnown RBP11□□□□□ -0.65
TOP3A-205ENST00000477508 MTCP1P56278 107 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 IL24Q13007 206 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 Q499Y3 187 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 TEX36Q5VZQ5 186 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 ZFP41Q8N8Y5 198 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 BOLLQ8N9W6 283 aaKnown RBP11□□□□□ -0.65
TOP3A-205ENST00000477508 RGP1Q92546 391 aaPredicted RBP11□□□□□ -0.65
TOP3A-205ENST00000477508 UFD1Q92890 307 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 TMEM106AQ96A25 262 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 MSI2Q96DH6 328 aaKnown RBP11□□□□□ -0.65
TOP3A-205ENST00000477508 OPALINQ96PE5 141 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 OR5M11Q96RB7 305 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 TMEM246Q9BRR3 403 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 CKLFQ9UBR5 152 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 MTORP42345 2549 aa11□□□□□ -0.65
TOP3A-205ENST00000477508 HIVEP2P31629 2446 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 IGKV1-9A0A0C4DH69 117 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 TRBV5-5A0A0J9YX44 114 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 F5H0A9 414 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 FOXH1O75593 365 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms