RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FOXO1Q12778 655 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 COX20Q5RI15 118 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 GLYATL3Q5SZD4 288 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 PPP1R32Q7Z5V6 425 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 RIMKLAQ8IXN7 391 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 NANOGP1Q8N7R0 232 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 DEFB108BQ8NET1 73 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 BEST4Q8NFU0 473 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 OR52I1Q8NGK6 324 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 OR5D18Q8NGL1 313 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 SUN5Q8TC36 379 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 MARCH1Q8TCQ1 289 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 EXTL1Q92935 676 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 KTI12Q96EK9 354 aaPredicted RBP4.09□□□□□ -1.75
CCNL1-215ENST00000474539 HSD17B10Q99714 261 aaKnown RBP4.09□□□□□ -1.75
CCNL1-215ENST00000474539 EMC6Q9BV81 110 aa4.09□□□□□ -1.75
CCNL1-215ENST00000474539 LOC100509620A0A075B734 347 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 A0A0U1RQV5 110 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 C20orf202A1L168 122 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SDCBPO00560 298 aaPredicted RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 FOXS1O43638 330 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TSPAN2O60636 221 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 LYZL6O75951 148 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR2A4O95047 310 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OPN1MWP04001 364 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TFAP2AP05549 437 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OPN1MW2P0DN77 364 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OPN1MW3P0DN78 364 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 HOXB3P14651 431 aaPredicted RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PDCD1Q15116 288 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PLPPR5Q32ZL2 321 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 ANKRD55Q3KP44 614 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PEAR1Q5VY43 1037 aaPredicted RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SHEQ5VZ18 495 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TGIF2LYQ8IUE0 185 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TGIF2LXQ8IUE1 241 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PDZD9Q8IXQ8 264 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SLC22A18ASQ8N1D0 253 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 DUSP18Q8NEJ0 188 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 BPIFCQ8NFQ6 507 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR10AD1Q8NGE0 317 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR5M1Q8NGP8 315 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 RPS4Y2Q8TD47 263 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 MZB1Q8WU39 189 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SNRNP27Q8WVK2 155 aaKnown RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SNX22Q96L94 193 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR2A7Q96R45 310 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SOX7Q9BT81 388 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 CBLN4Q9NTU7 201 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 FBXL2Q9UKC9 423 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 A0A0U1RQS6 177 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 SLC17A2O00624 439 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PTP4A3O75365 173 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 CCL3P10147 92 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PPP1CCP36873 323 aaKnown RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 NKX2-1P43699 371 aaPredicted RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 CEBPGP53567 150 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM33P57088 247 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TBR1Q16650 682 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 C11orf91Q3C1V1 193 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF385BQ569K4 471 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 CXorf66Q5JRM2 361 aaPredicted RBP4.09□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF767PQ75MW2 155 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 HMGN2P46Q86SG4 172 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 CALHM3Q86XJ0 350 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 NKAIN4Q8IVV8 208 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 TUSC5Q8IXB3 177 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 ACBD4Q8NC06 268 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR1K1Q8NGR3 316 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 OR10R2Q8NGX6 335 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 PFN4Q8NHR9 129 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 FAM168AQ92567 244 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 ITPKCQ96DU7 683 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 FAM60AQ9NP50 221 aa4.09□□□□□ -1.76
CCNL1-215ENST00000474539 COL4A6Q14031 1691 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 A0A0G2JLM5 398 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 LOC101059948A0A1B0GTJ6 334 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 J3QRK9 145 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 M0R036 132 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PPP6CO00743 305 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PHF1O43189 567 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 GREM1O60565 184 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 IGHV3-9P01782 118 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 HLA-DOBP13765 273 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 JUNBP17275 347 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PSMB1P20618 241 aaKnown RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PSMB3P49720 205 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TNFSF10P50591 281 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF136P52737 540 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 HMGA2P52926 109 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 CDONQ4KMG0 1287 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ADAM5Q6NVV9 412 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 Q6ZPB1 254 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 IDO2Q6ZQW0 420 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF511Q8NB15 262 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF485Q8NCK3 441 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 OR4S1Q8NGB4 309 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 OR2G2Q8NGZ5 317 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 OR4C12Q96R67 309 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms