RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 CDX4O14627 284 aaPredicted RBP12.24□□□□□ -0.45
GPC1-208ENST00000469694 TSPAN15O95858 294 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 IFNA6P05013 189 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 RAB6AP20340 208 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 UCP2P55851 309 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 MESTQ5EB52 335 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 MDGA2Q7Z553 956 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 OR10D4PQ8NGN7 298 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 SSX3Q99909 188 aa12.24□□□□□ -0.45
GPC1-208ENST00000469694 CFAP47Q6ZTR5 3102 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 H3BML4 177 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 PNPP00491 289 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 IFNA10P01566 189 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 BGLAPP02818 100 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 HKR1P10072 659 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 RPS10P46783 165 aaKnown RBP12.23□□□□□ -0.45
GPC1-208ENST00000469694 ACTBL2Q562R1 376 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 UNQ6494/PRO21346Q6UXR6 183 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 NKD1Q969G9 470 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 S100A13Q99584 98 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 C19orf25Q9UFG5 118 aaPredicted RBP12.23□□□□□ -0.45
GPC1-208ENST00000469694 PISDQ9UG56 409 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 AMDHD2Q9Y303 409 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 FLVCR1Q9Y5Y0 555 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 G3V3Y1 287 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 POLR2HP52434 150 aaKnown RBP12.23□□□□□ -0.45
GPC1-208ENST00000469694 PKIAP61925 76 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 IL15RAQ13261 267 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.45
GPC1-208ENST00000469694 SLC17A1Q14916 467 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 DNLZQ5SXM8 178 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 FAM219AQ8IW50 185 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 OR51A2Q8NGJ7 313 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 CMBLQ96DG6 245 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 INTS14Q96SY0 518 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 METTL7AQ9H8H3 244 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 GDF2Q9UK05 429 aaPredicted RBP12.23□□□□□ -0.45
GPC1-208ENST00000469694 HDGFL3Q9Y3E1 203 aa12.23□□□□□ -0.45
GPC1-208ENST00000469694 TRAV36DV7A0A075B6V5 113 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 IGHV1-45A0A0A0MS14 117 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 C9J4A7 227 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 OR2C1O95371 312 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 SFT2D2O95562 160 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 PET100P0DJ07 73 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 HLA-DOBP13765 273 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 RPS23P62266 143 aaKnown RBP12.22□□□□□ -0.45
GPC1-208ENST00000469694 GAMTQ14353 236 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 MEP1BQ16820 701 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 MIDNQ504T8 468 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 C1orf140Q5VVS0 124 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 GRINAQ7Z429 371 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 JAGN1Q8N5M9 183 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 UBAC2Q8NBM4 344 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 OR9K2Q8NGE7 335 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 OTOSQ8NHW6 89 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 OIT3Q8WWZ8 545 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 MAFIPQ8WZ33 124 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 C2orf50Q96LR7 162 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 WDR54Q9H977 334 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 A0A087X0M5 115 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 A0A1B0GX30 115 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 HLA-DQA2P01906 255 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 PMP2P02689 132 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 COX6A1P12074 109 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 CD59P13987 128 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 FSTP19883 344 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 RAP1AP62834 184 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 FOXF1Q12946 379 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 SLC9A3R2Q15599 337 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 TIPARPQ7Z3E1 657 aaKnown RBP12.22□□□□□ -0.45
GPC1-208ENST00000469694 LIPHQ8WWY8 451 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 NEU1Q99519 415 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 C2orf88Q9BSF0 95 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 EIF5A2Q9GZV4 153 aaKnown RBP12.22□□□□□ -0.45
GPC1-208ENST00000469694 PARP12Q9H0J9 701 aaKnown RBP12.22□□□□□ -0.45
GPC1-208ENST00000469694 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
GPC1-208ENST00000469694 MEGF11A6BM72 1044 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 SEC14L6B5MCN3 397 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 NPIPB7O75200 414 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 JTBO76095 146 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 F10P00742 488 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 FREM3P0C091 2139 aa12.21□□□□□ -0.45
GPC1-208ENST00000469694 TBPP20226 339 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms