RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 HLA-DPB1P04440 258 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A15PP0C7V4 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A14PP0C7W9 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CECR9P0C854 216 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OCM2P0CE71 109 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OCMP0CE72 109 aaPredicted RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 COX5BP10606 129 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF14P17017 642 aaPredicted RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ACHEP22303 614 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CRYGSP22914 178 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CALRP27797 417 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CALCRP30988 508 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GABRA5P31644 462 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CCKARP32238 428 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 DCTDP32321 178 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TTKP33981 857 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 THBS4P35443 961 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CRYBB2P43320 205 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 RAD52P43351 418 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FABP6P51161 128 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CCR9P51686 369 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 UCP2P55851 309 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CAV3P56539 151 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ERVS71-1P61550 626 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PPP1CBP62140 327 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NAAAQ02083 359 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 BDH1Q02338 343 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF92Q03936 586 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SPOCK1Q08629 439 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GPR50Q13585 617 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TRAM1Q15629 374 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ALKBH6Q3KRA9 238 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TIMM50Q3ZCQ8 353 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 Q499Y3 187 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 HSD17B12Q53GQ0 312 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 YIF1BQ5BJH7 314 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM27D1Q5T7N8 215 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OR2T2Q6IF00 324 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC22A25Q6T423 547 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM91Q6ZNR0 172 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 MOB3CQ70IA8 216 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PGAP1Q75T13 922 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 MRPL21Q7Z2W9 205 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OR51A4Q8NGJ6 313 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OR5L1Q8NGL2 311 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NDNFQ8TB73 568 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SLC25A40Q8TBP6 338 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 HAVCR2Q8TDQ0 301 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GPR148Q8TDV2 347 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NPRL2Q8WTW4 380 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PIGCQ92535 297 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 RGP1Q92546 391 aaPredicted RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 APOBEC3DQ96AK3 386 aaPredicted RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 C12orf43Q96C57 262 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ISOC1Q96CN7 298 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 DGCR14Q96DF8 476 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CMBLQ96DG6 245 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SMIM19Q96E16 107 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PIK3IP1Q96FE7 263 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TRMT61AQ96FX7 289 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 LYZL4Q96KX0 146 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PGLYRP3Q96LB9 341 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF75AQ96N20 296 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 DCUN1D5Q9BTE7 237 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 C1QTNF5Q9BXJ0 243 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 OR2J1Q9GZK6 312 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TPK1Q9H3S4 243 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NGBQ9NPG2 151 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 BATF3Q9NR55 127 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GPR173Q9NS66 373 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SNTG1Q9NSN8 517 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TXNL4BQ9NX01 149 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NDUFB11Q9NX14 153 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TAS2R4Q9NYW5 299 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 RSL24D1Q9UHA3 163 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 NUFIP1Q9UHK0 495 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ENPP5Q9UJA9 477 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 POU2F3Q9UKI9 436 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 HHLA2Q9UM44 414 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 PIGLQ9Y2B2 252 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 AK6Q9Y3D8 172 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ESPL1Q14674 2120 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TLN1Q9Y490 2541 aaKnown RBP3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 CACNA1CQ13936 2221 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 USP24Q9UPU5 2620 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 INTS1Q8N201 2190 aaKnown RBP3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 IGHV3-64DA0A0J9YX35 117 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM230AA0A1W2PPH8 454 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF850A8MQ14 1090 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 PRSS44E7EML9 344 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 ATP6V1G2-DDX39BF2Z307 99 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 H3BMQ9 156 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 J3QKU1 62 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 ABCD4O14678 606 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 PIN1P1O15428 100 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 XRCC2O43543 280 aa3.48□□□□□ -1.85
TMEM39A-204ENST00000468545 TIMM8AO60220 97 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms