RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 DUX4L4P0CJ87 422 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DUX4L5P0CJ88 424 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DUX4L6P0CJ89 424 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DUX4L7P0CJ90 424 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 CCL1P22362 96 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 GLRA1P23415 457 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 GMFBP60983 142 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 ARF6P62330 175 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 ACTG1P63261 375 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 BAMBIQ13145 260 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 PDCD1Q15116 288 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 LRRC10Q5BKY1 277 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DMRTC1Q5HYR2 192 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 GPR157Q5UAW9 335 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 METTL11BQ5VVY1 283 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 PLCXD3Q63HM9 321 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DUX4L9Q6RFH8 374 aaPredicted RBP15□□□□□ -0.01
CGREF1-208ENST00000467539 KCTD20Q7Z5Y7 419 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 CATSPERDQ86XM0 798 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 OR10H4Q8NGA5 316 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 ST8SIA4Q92187 359 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 RORBQ92753 470 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 C1orf147Q96MC9 270 aaPredicted RBP15□□□□□ -0.01
CGREF1-208ENST00000467539 TBX15Q96SF7 602 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 SIRPDQ9H106 197 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 ZMAT3Q9HA38 289 aaKnown RBP15□□□□□ -0.01
CGREF1-208ENST00000467539 S100A14Q9HCY8 104 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 SNTG1Q9NSN8 517 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 DUX4Q9UBX2 424 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 TENM1Q9UKZ4 2725 aa15□□□□□ -0.01
CGREF1-208ENST00000467539 CENPVL3A0A0U1RRI6 287 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 OR2AT4A6NND4 320 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 CLDN34H7C241 214 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 J3QRE1 110 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 SFTPBP07988 381 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 ZNF573Q86YE8 665 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 FGFRL1Q8N441 504 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 FAM216BQ8N7L0 139 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 CCDC54Q8NEL0 328 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 TMIGD2Q96BF3 282 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 C9orf16Q9BUW7 83 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 NLKQ9UBE8 527 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 KPTNQ9Y664 436 aa14.99□□□□□ -0.01
CGREF1-208ENST00000467539 NOS1APO75052 506 aaPredicted RBP14.98□□□□□ -0.01
CGREF1-208ENST00000467539 PSG2P11465 335 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 ISL1P61371 349 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 IL13RA1P78552 427 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 ZNF85Q03923 595 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 CDONQ4KMG0 1287 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 HAGHLQ6PII5 290 aaPredicted RBP14.98□□□□□ -0.01
CGREF1-208ENST00000467539 BRD3OSQ6XYD6 125 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 C8orf46Q8TAG6 207 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 GAFA1Q96PS6 74 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 SLC29A1Q99808 456 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 DCTN5Q9BTE1 182 aa14.98□□□□□ -0.01
CGREF1-208ENST00000467539 PQLC2LA1A4F0 135 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 DNAJC9-AS1A6NH13 148 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 SIGLEC5O15389 551 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 CAV3P56539 151 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 IKZF1Q13422 519 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 SLC9A3R2Q15599 337 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 DGUOKQ16854 277 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 DEFB112Q30KQ8 113 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 ZBTB49Q6ZSB9 765 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 C1orf122Q6ZSJ8 110 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 PRSS35Q8N3Z0 413 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 POC1AQ8NBT0 407 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 RNF166Q96A37 237 aaPredicted RBP14.97□□□□□ -0.01
CGREF1-208ENST00000467539 SLC25A28Q96A46 364 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 RNFT2Q96EX2 444 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 MBOAT4Q96T53 435 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 ADI1Q9BV57 179 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 NOX4Q9NPH5 578 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 GPR173Q9NS66 373 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 EXOGQ9Y2C4 368 aaKnown RBP14.97□□□□□ -0.01
CGREF1-208ENST00000467539 PCDHGB1Q9Y5G3 927 aa14.97□□□□□ -0.01
CGREF1-208ENST00000467539 IGKV1D-17A0A075B6S4 117 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 A0A1B0GVI7 797 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 A6NIN4 97 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 NKX6-3A6NJ46 265 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 SNTNA6NMZ2 147 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 SYT7O43581 403 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 RNASE1P07998 156 aaKnown RBP14.96□□□□□ -0.01
CGREF1-208ENST00000467539 HKR1P10072 659 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 GABRB1P18505 474 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 HAAOP46952 286 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 EGFL6Q8IUX8 553 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 PQLC1Q8N2U9 271 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 RHOXF1Q8NHV9 184 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 GATAD2BQ8WXI9 593 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 SDSLQ96GA7 329 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 DUX5Q96PT3 197 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 SLC25A10Q9UBX3 287 aaPredicted RBP14.96□□□□□ -0.01
CGREF1-208ENST00000467539 GNG8Q9UK08 70 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 ZNF222Q9UK12 451 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 MAB21L2Q9Y586 359 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 GMPPBQ9Y5P6 360 aa14.96□□□□□ -0.01
CGREF1-208ENST00000467539 IGHV1-69DA0A0B4J2H0 117 aa14.95□□□□□ -0.02
CGREF1-208ENST00000467539 DAPL1A0PJW8 107 aa14.95□□□□□ -0.02
CGREF1-208ENST00000467539 J3QT63 122 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms