RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-206	ENST00000466971	TBRG1	Q3YBR2	411 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF260	Q3ZCT1	412 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ACSF3	Q4G176	576 aa	Predicted RBP	4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SLC22A6	Q4U2R8	563 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	RNASE10	Q5GAN6	216 aa	Known RBP	4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	VAX1	Q5SQQ9	334 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SFRP5	Q5T4F7	317 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	FAM180A	Q6UWF9	173 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PLXDC2	Q6UX71	529 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	TFAP2E	Q6VUC0	442 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	BEND4	Q6ZU67	534 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	C22orf34	Q6ZV56	151 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	LINC00596	Q86U02	117 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	TMEM200A	Q86VY9	491 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	TMEM17	Q86X19	198 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ZDHHC23	Q8IYP9	409 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ARRDC1	Q8N5I2	433 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	CHST4	Q8NCG5	386 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	CPEB3	Q8NE35	698 aa	Known RBP	4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SLC30A7	Q8NEW0	376 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	OR5A2	Q8NGI9	324 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	OR51T1	Q8NGJ9	327 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	TNFAIP8L1	Q8WVP5	186 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SNAPC3	Q92966	411 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SEH1L	Q96EE3	360 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	HIST1H2AA	Q96QV6	131 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SLX1A	Q9BQ83	275 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	GINS4	Q9BRT9	223 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	SFXN3	Q9BWM7	321 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	CHST6	Q9GZX3	395 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	LPAR5	Q9H1C0	372 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	MED28	Q9H204	178 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	OR51J1	Q9H342	316 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PLK3	Q9H4B4	646 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	CDH20	Q9HBT6	801 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	NOX3	Q9HBY0	568 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	IFT46	Q9NQC8	304 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PLSCR4	Q9NRQ2	329 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	B3GNT2	Q9NY97	397 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PRSS50	Q9UI38	385 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	TUBD1	Q9UJT1	453 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ITGB1BP2	Q9UKP3	347 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	HSF4	Q9ULV5	492 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ANAPC10	Q9UM13	185 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	ING4	Q9UNL4	249 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	PROCR	Q9UNN8	238 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	AMDHD2	Q9Y303	409 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	GPR179	Q6PRD1	2367 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	BDP1	A6H8Y1	2624 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	UNC79	Q9P2D8	2635 aa		4.14	□□□□□ -1.75
NFX1-206	ENST00000466971	KNTC1	P50748	2209 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	PHF3	Q92576	2039 aa	Known RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	TRAV6	A0A075B6T7	132 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971		A0A0A6YYJ9	748 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971		E9PLN8	166 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	BOLA2-SMG1P6	H3BVE0	249 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971		K7ENP7	123 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	MFNG	O00587	321 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	IGKV3-15	P01624	115 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	IFNA6	P05013	189 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	GLA	P06280	429 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	FCER2	P06734	321 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	PATE4	P0C8F1	98 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	TMEM225B	P0DP42	221 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	ANXA3	P12429	323 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF14	P17017	642 aa	Predicted RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	NAT1	P18440	290 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	C4BPB	P20851	252 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	CCNO	P22674	350 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	IGHV1-2	P23083	117 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	DTYMK	P23919	212 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	RAD52	P43351	418 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	VEGFC	P49767	419 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	PER3	P56645	1201 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	TAS2R31	P59538	309 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	ZP1	P60852	638 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	UBE2M	P61081	183 aa	Known RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	HGFAC	Q04756	655 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	PDZK1IP1	Q13113	114 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	SRSF6	Q13247	344 aa	Known RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	ARFRP1	Q13795	201 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	GABRA6	Q16445	453 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	C3AR1	Q16581	482 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	MPV17L	Q2QL34	196 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	CEACAM21	Q3KPI0	293 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	CDNF	Q49AH0	187 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	RNASE12	Q5GAN4	147 aa	Known RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	NHLRC3	Q5JS37	347 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	C1orf185	Q5T7R7	199 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	PLCXD3	Q63HM9	321 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	ELP2	Q6IA86	826 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	LPCAT3	Q6P1A2	487 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	C11orf88	Q6PI97	169 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	FBXW12	Q6X9E4	464 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	MOB3C	Q70IA8	216 aa		4.13	□□□□□ -1.75
NFX1-206	ENST00000466971	TRAPPC6B	Q86SZ2	158 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms