RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MRPL13Q9BYD1 178 aaKnown RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 NMNAT2Q9BZQ4 307 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 MED20Q9H944 212 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 FGF20Q9NP95 211 aaPredicted RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 INPP5EQ9NRR6 644 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 COMMD3-BMI1R4GMX3 469 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 IGHV3-64DA0A0J9YX35 117 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 OR6C68A6NDL8 312 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 CCDC182A6NF36 153 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 H3BUX3 64 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 GLCEO94923 617 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 TFAP2AP05549 437 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 JUNBP17275 347 aaPredicted RBP12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 GSTT1P30711 240 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 PMELP40967 661 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 ZNF367Q7RTV3 350 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 GPR141Q7Z602 305 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 C19orf18Q8NEA5 215 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 OR51G2Q8NGK0 314 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 OR52I1Q8NGK6 324 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 MRPL48Q96GC5 212 aaKnown RBP12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 DDOQ99489 341 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 TEAD3Q99594 435 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 JAM3Q9BX67 310 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 HCAR1Q9BXC0 346 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 SYT4Q9H2B2 425 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 SMURF1Q9HCE7 757 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 RAB18Q9NP72 206 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 ACOT13Q9NPJ3 140 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 EXOGQ9Y2C4 368 aaKnown RBP12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 UGT2A1Q9Y4X1 527 aa12.01□□□□□ -0.49
HMGXB4-206ENST00000466438 SMIM31A0A1B0GVY4 71 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 H7C1C5 153 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 NPFFO15130 113 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 GYPBP06028 91 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 C21orf33P30042 268 aaPredicted RBP12□□□□□ -0.49
HMGXB4-206ENST00000466438 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
HMGXB4-206ENST00000466438 ALDH3B2P48448 385 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 LCN6P62502 163 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 KCNJ8Q15842 424 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 SGCAQ16586 387 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 C11orf91Q3C1V1 193 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 FAM27BQ5VT28 67 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 OR5AS1Q8N127 324 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 OR6K6Q8NGW6 343 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 RBP7Q96R05 134 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 NPFFR1Q9GZQ6 430 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 TIMM10BQ9Y5J6 103 aa12□□□□□ -0.49
HMGXB4-206ENST00000466438 TRMUO75648 421 aaKnown RBP11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 ZFPL1O95159 310 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 ECDO95905 644 aaPredicted RBP11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 IGHA1P01876 353 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 CLUP10909 449 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 FAHP16930 419 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 GATA4P43694 442 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 IRF3Q14653 427 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 XAF1Q6GPH4 301 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 ZBTB46Q86UZ6 589 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 OR8G5Q8NG78 346 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 Q8TCH9 128 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 WIPF2Q8TF74 440 aaPredicted RBP11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 DPF1Q92782 380 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 MUL1Q969V5 352 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 COG8Q96MW5 612 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 MNTQ99583 582 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 SERTAD4Q9NUC0 356 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 STARD10Q9Y365 291 aa11.99□□□□□ -0.49
HMGXB4-206ENST00000466438 F5H5P2 479 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 MLNRO43193 412 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 ADAM20O43506 726 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 SLC16A7O60669 478 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 NOL3O60936 208 aaKnown RBP11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 KHDRBS3O75525 346 aaKnown RBP11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 CST2P09228 141 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 PF4V1P10720 104 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 RAC2P15153 192 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 LMO1P25800 156 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 PSMB9P28065 219 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 SAA4P35542 130 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 PCBD1P61457 104 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 LY6EQ16553 131 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 CRIP3Q6Q6R5 217 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 TMPRSS11AQ6ZMR5 421 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 SATL1Q86VE3 508 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 ACBD7Q8N6N7 88 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 OR10H4Q8NGA5 316 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 NSMAFQ92636 917 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
HMGXB4-206ENST00000466438 RERGLQ9H628 205 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms