RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 FAM90A1Q86YD7 464 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 STX19Q8N4C7 294 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 OR5AK2Q8NH90 309 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 GATAD2BQ8WXI9 593 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 AQP3Q92482 292 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 FGGYQ96C11 551 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 HIF1ANQ9NWT6 349 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 CHCHD3Q9NX63 227 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 ERVK-18Q9QC07 812 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 MIOXQ9UGB7 285 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 RAB26Q9ULW5 256 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 PCDHGB5Q9Y5G0 923 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 C2CD3Q4AC94 2353 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 TRAV20A0A0B4J274 112 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 TRBV2A0A0J9YWF9 115 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 KIAA1324LA8MWY0 1029 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 CRLF1O75462 422 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 CDK1P06493 297 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 SLC35A2P78381 396 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 MED21Q13503 144 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 DOC2BQ14184 412 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 RNLSQ5VYX0 342 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 GLCCI1Q86VQ1 547 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 PP6455Q8WZ26 134 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 RGP1Q92546 391 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 SGCDQ92629 289 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 SEH1LQ96EE3 360 aa17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 POLR3KQ9Y2Y1 108 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-210ENST00000460909 NAV3Q8IVL0 2385 aa17.21■□□□□ 0.34
RPUSD3-210ENST00000460909 MXRA5Q9NR99 2828 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 TRAV38-1A0A0B4J264 116 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 IGKV1-9A0A0C4DH69 117 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 A8MXK9 166 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 PTGES3LE9PB15 166 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 RPSAP08865 295 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 RPS2P15880 293 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 HAGHLQ6PII5 290 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 ZNF841Q6ZN19 808 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 UTS2BQ765I0 119 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 ZNF573Q86YE8 665 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 NANOGP1Q8N7R0 232 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 NEIL1Q96FI4 390 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 COMMD4Q9H0A8 199 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 WDR13Q9H1Z4 485 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 DUSP21Q9H596 190 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 TRIM36Q9NQ86 728 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 SCN3BQ9NY72 215 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 DOCK11Q5JSL3 2073 aa17.2■□□□□ 0.34
RPUSD3-210ENST00000460909 IGKV1-27A0A075B6S5 117 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 IGHV3OR15-7A0A075B7D8 119 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 AKR7A2O43488 359 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 GATBO75879 557 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 SERPINA3P01011 423 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 MUC1P15941 1255 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 HAAOP46952 286 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 LCN2P80188 198 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 KCNJ8Q15842 424 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 CR1LQ2VPA4 569 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 FAM120AOSQ5T036 256 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 DMKNQ6E0U4 476 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 CALHM1Q8IU99 346 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 OR13C3Q8NGS6 347 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 CNBD2Q96M20 576 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 TECTBQ96PL2 329 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 CDCA4Q9BXL8 241 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 CTSZQ9UBR2 303 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 SLC7A11Q9UPY5 501 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 LRCH1Q9Y2L9 728 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 WNK2Q9Y3S1 2297 aa17.19■□□□□ 0.34
RPUSD3-210ENST00000460909 TRAPPC2LH3BP13 241 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 J3QT63 122 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 PHF1O43189 567 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 NDUFA2O43678 99 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 SYNGR1O43759 233 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 FOXH1O75593 365 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 FCN3O75636 299 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 GYPAP02724 150 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 MPZP25189 248 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 FUT6P51993 359 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 MICBQ29980 383 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 PARP16Q8N5Y8 322 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 ZNF671Q8TAW3 534 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 TRMT10AQ8TBZ6 339 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 NPRL2Q8WTW4 380 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 C12orf43Q96C57 262 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 SMIM19Q96E16 107 aa17.18■□□□□ 0.34
RPUSD3-210ENST00000460909 PPIAL4CA0A0B4J2A2 164 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 NOS1APO75052 506 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 ZNF20P17024 532 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 ATF1P18846 271 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 AMY2BP19961 511 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 CRHBPP24387 322 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 WNT4P56705 351 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 RIPPLY3P57055 190 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 PAX2Q02962 417 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 ESCO2Q56NI9 601 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 ANGPTL5Q86XS5 388 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 DNAAF1Q8NEP3 725 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 OR8B3Q8NGG8 313 aa17.17■□□□□ 0.34
RPUSD3-210ENST00000460909 MYDGFQ969H8 173 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms