RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ACOT13Q9NPJ3 140 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 CSPG4Q6UVK1 2322 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 TRBV5-5A0A0J9YX44 114 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 PQLC2LA1A4F0 135 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 TNFAIP8O95379 198 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 CYB5R3P00387 301 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-209ENST00000460573 ATF1P18846 271 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 BTG1P62324 171 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 TPBGQ13641 420 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 DOC2BQ14184 412 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 SPARTQ8N0X7 666 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 MUC20Q8N307 709 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-209ENST00000460573 OR10Z1Q8NGY1 313 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 TMEM106AQ96A25 262 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 SPSB1Q96BD6 273 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 BORCS8Q96FH0 119 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 MGLLQ99685 303 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 DCAF16Q9NXF7 216 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 TLN2Q9Y4G6 2542 aa18.89■□□□□ 0.61
C9orf3-209ENST00000460573 PPIAL4EA0A075B759 164 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 PNMA8CA0A1B0GUJ8 204 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 hCG_1807616A0A1W2PRN6 198 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 PPIAL4DF5H284 164 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 CDIPTO14735 213 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 IGHV2-70P01814 119 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 OCMP0CE72 109 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-209ENST00000460573 HSMCR30P0CW71 290 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 PPIAL4FP0DN26 164 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 MDH2P40926 338 aaKnown RBP18.88■□□□□ 0.61
C9orf3-209ENST00000460573 SOX2P48431 317 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 RPS11P62280 158 aaKnown RBP eCLIP18.88■□□□□ 0.61
C9orf3-209ENST00000460573 TMEM155Q4W5P6 130 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 AVPI1Q5T686 147 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 ZNF773Q6PK81 442 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 WDR82Q6UXN9 313 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 ZNF826PQ6ZT77 177 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 ZNF671Q8TAW3 534 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 FCGR1BQ92637 280 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 RPL3LQ92901 407 aaKnown RBP18.88■□□□□ 0.61
C9orf3-209ENST00000460573 YAE1D1Q9NRH1 226 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 PPIAL4AQ9Y536 164 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 NSD1Q96L73 2696 aaPredicted RBP18.88■□□□□ 0.61
C9orf3-209ENST00000460573 CR1P17927 2039 aa18.88■□□□□ 0.61
C9orf3-209ENST00000460573 IGHV4-61A0A0C4DH41 118 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 SULT1B1O43704 296 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 LHBP01229 141 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 FN1P02751 2386 aaKnown RBP18.87■□□□□ 0.61
C9orf3-209ENST00000460573 MAPK3P27361 379 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-209ENST00000460573 HAAOP46952 286 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 RBP2P50120 134 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 ATP1B3P54709 279 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 DMRTC1Q5HYR2 192 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 LRRC28Q86X40 367 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-209ENST00000460573 LRRC29Q8WV35 223 aa18.87■□□□□ 0.61
C9orf3-209ENST00000460573 IGKV1-9A0A0C4DH69 117 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 FAM230AA0A1W2PPH8 454 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 ISPDA4D126 451 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 CPEP16870 476 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 CPT2P23786 658 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 AZGP1P25311 298 aaKnown RBP18.86■□□□□ 0.61
C9orf3-209ENST00000460573 TRAM1Q15629 374 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 KCNJ8Q15842 424 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 UBE2UQ5VVX9 321 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 LHFPL2Q6ZUX7 228 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 SPICQ8N5J4 248 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 GCSAMQ8N6F7 178 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 OR13C9Q8NGT0 318 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 TRMT10AQ8TBZ6 339 aaKnown RBP18.86■□□□□ 0.61
C9orf3-209ENST00000460573 AQP3Q92482 292 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 OPALINQ96PE5 141 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 PKIBQ9C010 78 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 POLDIP2Q9Y2S7 368 aa18.86■□□□□ 0.61
C9orf3-209ENST00000460573 MAGEA13PA6NCF6 341 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 ZNF879B4DU55 563 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 J3QT63 122 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 RAB3AP20336 220 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 PCMT1P22061 227 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 PSMA1P25786 263 aaKnown RBP18.85■□□□□ 0.61
C9orf3-209ENST00000460573 ZMYND11Q15326 602 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 LIPKQ5VXJ0 399 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 ZNF529Q6P280 563 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 HAGHLQ6PII5 290 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-209ENST00000460573 OR13C5Q8NGS8 318 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 CLDND2Q8NHS1 167 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 NPRL2Q8WTW4 380 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 CPNE2Q96FN4 548 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-209ENST00000460573 TMEM165Q9HC07 324 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 CKLFQ9UBR5 152 aa18.85■□□□□ 0.61
C9orf3-209ENST00000460573 ABCA2Q9BZC7 2435 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 TRAV38-1A0A0B4J264 116 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 SRRM5B3KS81 715 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 LGALS8O00214 317 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 MAGEB3O15480 346 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 GPX5O75715 221 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 ACAA1P09110 424 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-209ENST00000460573 MPZP25189 248 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 MTCP1P56278 107 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 RAB39BQ96DA2 213 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 OR14A2Q96R54 314 aa18.84■□□□□ 0.61
C9orf3-209ENST00000460573 GAL3ST1Q99999 423 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms