RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR51G2Q8NGK0 314 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 OR2T27Q8NH04 317 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 ZNF671Q8TAW3 534 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 GATAD2BQ8WXI9 593 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 RBM4BQ9BQ04 359 aaKnown RBP15.98■□□□□ 0.15
USP40-207ENST00000450940 ZNF747Q9BV97 191 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 SNTG1Q9NSN8 517 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 ACOXLQ9NUZ1 547 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 NLKQ9UBE8 527 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 SNX5Q9Y5X3 404 aa15.98■□□□□ 0.15
USP40-207ENST00000450940 A0A1B0GVI7 797 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 NKX6-3A6NJ46 265 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 OR2AT4A6NND4 320 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 DLGAP1O14490 977 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 NRASP01111 189 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 CCL1P22362 96 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 GLRA1P23415 457 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 CAV3P56539 151 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 IL13RA1P78552 427 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 IKZF1Q13422 519 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 DGUOKQ16854 277 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 BCL2L15Q5TBC7 163 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 METAP1DQ6UB28 335 aaPredicted RBP15.97■□□□□ 0.15
USP40-207ENST00000450940 SSX6Q7RTT6 188 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 TMEM86BQ8N661 226 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 OR14K1Q8NGZ2 314 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 LHX4Q969G2 390 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 ZDHHC16Q969W1 377 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 RASL12Q9NYN1 266 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 ZNF222Q9UK12 451 aa15.97■□□□□ 0.15
USP40-207ENST00000450940 IGKV1D-17A0A075B6S4 117 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 E9PQ18 207 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 SULT1C4O75897 302 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 PSG2P11465 335 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 SELLP14151 372 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 GMFBP60983 142 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 DMRTC1Q5HYR2 192 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 CLVS2Q5SYC1 327 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 PLCXD3Q63HM9 321 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 C1orf122Q6ZSJ8 110 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 SGMS2Q8NHU3 365 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 PYDC1Q8WXC3 89 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 EME1Q96AY2 570 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 TMIGD2Q96BF3 282 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 RIBC2Q9H4K1 309 aa15.96■□□□□ 0.15
USP40-207ENST00000450940 A0A1W2PQL4 384 aaPredicted RBP15.95■□□□□ 0.14
USP40-207ENST00000450940 SAC3D1A6NKF1 404 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 H3BNX3 289 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 NOS1APO75052 506 aaPredicted RBP15.95■□□□□ 0.14
USP40-207ENST00000450940 TFF1P04155 84 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 ALPLP05186 524 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 KRT8P05787 483 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 MELTFP08582 738 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 SLC25A30Q5SVS4 291 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 HAGHLQ6PII5 290 aaPredicted RBP15.95■□□□□ 0.14
USP40-207ENST00000450940 PLEKHG7Q6ZR37 379 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 VMO1Q7Z5L0 202 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 CATSPERDQ86XM0 798 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 CMTM4Q8IZR5 234 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 Q8N7P7 452 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 POC1AQ8NBT0 407 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 TRUB1Q8WWH5 349 aaKnown RBP15.95■□□□□ 0.14
USP40-207ENST00000450940 RFKQ969G6 155 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 SDSLQ96GA7 329 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 USE1Q9NZ43 259 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 SLC25A10Q9UBX3 287 aaPredicted RBP15.95■□□□□ 0.14
USP40-207ENST00000450940 SLC22A13Q9Y226 551 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 MAB21L2Q9Y586 359 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 PCDHGB1Q9Y5G3 927 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 POMT1Q9Y6A1 747 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 PKD1L1Q8TDX9 2849 aa15.95■□□□□ 0.14
USP40-207ENST00000450940 PQLC2LA1A4F0 135 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 METTL15A6NJ78 407 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 POM121CA8CG34 1229 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 MPZP25189 248 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 CDC42P60953 191 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 ISL1P61371 349 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 ZNF573Q86YE8 665 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 YIPF7Q8N8F6 280 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 NPRL2Q8WTW4 380 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 RORBQ92753 470 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 HRASLS5Q96KN8 279 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 TBX5Q99593 518 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 UNKLQ9H9P5 680 aaKnown RBP15.94■□□□□ 0.14
USP40-207ENST00000450940 ONECUT1Q9UBC0 465 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 GTF2A1LQ9UNN4 478 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 MMP24Q9Y5R2 645 aa15.94■□□□□ 0.14
USP40-207ENST00000450940 J3QT63 122 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 PGA5P0DJD9 388 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 ZFP1Q6P2D0 407 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 SHISA2Q6UWI4 295 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 ACP7Q6ZNF0 438 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 LDLRAD3Q86YD5 345 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 SSMEM1Q8WWF3 244 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 TNFRSF14Q92956 283 aa15.93■□□□□ 0.14
USP40-207ENST00000450940 A0A0U1RQK1 487 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 FAM181BA6NEQ2 426 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 M0R1W7 72 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 RPP14O95059 124 aaKnown RBP15.92■□□□□ 0.14
USP40-207ENST00000450940 HAAOP46952 286 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms