RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 RIPPLY3P57055 190 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 UBE2V2Q15819 145 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 XAF1Q6GPH4 301 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 GLCCI1Q86VQ1 547 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 FAM90A1Q86YD7 464 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF573Q86YE8 665 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 DNAAF1Q8NEP3 725 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 OR51A4Q8NGJ6 313 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 OR5AK2Q8NH90 309 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 AQP3Q92482 292 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 RPL3LQ92901 407 aaKnown RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 TMEM186Q96B77 213 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 C12orf43Q96C57 262 aaKnown RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 ADAT3Q96EY9 351 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 METTL17Q9H7H0 456 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 GPR173Q9NS66 373 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 CHCHD3Q9NX63 227 aaKnown RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 KAAG1Q9UBP8 84 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 PCDHB10Q9UN67 800 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 TRBV2A0A0J9YWF9 115 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 hCG_1807616A0A1W2PRN6 198 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 KIAA1324LA8MWY0 1029 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 J3QT63 122 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 PLPP2O43688 288 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 CRLF1O75462 422 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 FOXH1O75593 365 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ALX3O95076 343 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF205O95201 554 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 MT-ND2P03891 347 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 FUT6P51993 359 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ATPAF1Q5TC12 328 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 DMKNQ6E0U4 476 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF841Q6ZN19 808 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 KCTD8Q6ZWB6 473 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 STX19Q8N4C7 294 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 NANOGP1Q8N7R0 232 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 RGP1Q92546 391 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 DACT3Q96B18 629 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 SMIM19Q96E16 107 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF184Q99676 751 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 PDCD1LG2Q9BQ51 273 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 PKIBQ9C010 78 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 DNTTIP1Q9H147 329 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 SCN3BQ9NY72 215 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 ERVK-18Q9QC07 812 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 PCDHGB5Q9Y5G0 923 aa11.99□□□□□ -0.49
COL3A1-203ENST00000450867 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
COL3A1-203ENST00000450867 IGKV1-9A0A0C4DH69 117 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 A6NIN4 97 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 SERPINA3P01011 423 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 CD1AP06126 327 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
COL3A1-203ENST00000450867 GATA3P23771 443 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 CRHBPP24387 322 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 ZFP36P26651 326 aaKnown RBP11.98□□□□□ -0.49
COL3A1-203ENST00000450867 WNT4P56705 351 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 TAS2R43P59537 309 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 SEC61A1P61619 476 aaKnown RBP11.98□□□□□ -0.49
COL3A1-203ENST00000450867 BDH1Q02338 343 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 PAX2Q02962 417 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 ACSM1Q08AH1 577 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 IRF3Q14653 427 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 CNN3Q15417 329 aaKnown RBP11.98□□□□□ -0.49
COL3A1-203ENST00000450867 C11orf91Q3C1V1 193 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 ESCO2Q56NI9 601 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 DMRTC1Q5HYR2 192 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 STUMQ69YW2 141 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF529Q6P280 563 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 LYPD2Q6UXB3 125 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 OR13C3Q8NGS6 347 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF671Q8TAW3 534 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 MYDGFQ969H8 173 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 FGGYQ96C11 551 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 LPAR3Q9UBY5 353 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 CDC42EP3Q9UKI2 254 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 SLC7A11Q9UPY5 501 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 LSM2Q9Y333 95 aaKnown RBP11.98□□□□□ -0.49
COL3A1-203ENST00000450867 TPRKBQ9Y3C4 175 aa11.98□□□□□ -0.49
COL3A1-203ENST00000450867 IGKV1-27A0A075B6S5 117 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 C3orf80F5H4A9 247 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 H3BSH0 61 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 MYL12BO14950 172 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 RRP9O43818 475 aaKnown RBP11.97□□□□□ -0.49
COL3A1-203ENST00000450867 RHBDL1O75783 438 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 PGA5P0DJD9 388 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF20P17024 532 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 ATF1P18846 271 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 HAAOP46952 286 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 PITPNBP48739 271 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 NPY4RP50391 375 aa11.97□□□□□ -0.49
COL3A1-203ENST00000450867 ERVK11-1P61568 191 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms