RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TMEM106BQ9NUM4 274 aa11.54□□□□□ -0.56
PDLIM2-213ENST00000448520 PURGQ9UJV8 347 aaKnown RBP11.54□□□□□ -0.56
PDLIM2-213ENST00000448520 NUP50Q9UKX7 468 aa11.54□□□□□ -0.56
PDLIM2-213ENST00000448520 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 TFAP2AP05549 437 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 HKR1P10072 659 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 KITLGP21583 273 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 ACKR3P25106 362 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 TGFBR2P37173 567 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 SOX2P48431 317 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 RPS11P62280 158 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 BDH1Q02338 343 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 MALLQ13021 153 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 DMRTC1Q5HYR2 192 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 SYT6Q5T7P8 510 aaPredicted RBP11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 PGAP1Q75T13 922 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 DOK3Q7L591 496 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 BHLHE23Q8NDY6 225 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 OR56B2PQ8NGI1 322 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 OR5L1Q8NGL2 311 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 ORAI1Q96D31 301 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 SP140LQ9H930 580 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 ISYNA1Q9NPH2 558 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 SF3B6Q9Y3B4 125 aaKnown RBP11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 AUP1Q9Y679 476 aa11.53□□□□□ -0.56
PDLIM2-213ENST00000448520 A0A1B0GVI7 797 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 GGT3PA6NGU5 568 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM212A6NML5 194 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 J3QW42 95 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 SYT7O43581 403 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 UBCP0CG48 685 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF12P17014 697 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 CCL1P22362 96 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 PRTN3P24158 256 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 ALDH3B2P48448 385 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 GSK3AP49840 483 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF154Q13106 437 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 SPRNQ5BIV9 151 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 FBXW12Q6X9E4 464 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 C22orf15Q8WYQ4 148 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 HAVCR1Q96D42 359 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 MRI1Q9BV20 369 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 VCX3AQ9NNX9 186 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 MMP26Q9NRE1 261 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF281Q9Y2X9 895 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
PDLIM2-213ENST00000448520 A0A1W2PPK0 400 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 ANKRD61A6NGH8 418 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 CD300LBA8K4G0 201 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 TRAPPC2LH3BP13 241 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 WIPF1O43516 503 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 ISG15P05161 165 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 RAC2P15153 192 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 FAHP16930 419 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 BTG1P62324 171 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 OR8B8Q15620 311 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 FAM27D1Q5T7N8 215 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM244Q5VVB8 128 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 MUC20Q8N307 709 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 PLPP7Q8NBV4 271 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 TSEN15Q8WW01 171 aaKnown RBP11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 ADAT3Q96EY9 351 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 OR14A2Q96R54 314 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 RGCCQ9H4X1 137 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 SCOCQ9UIL1 159 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 HHLA2Q9UM44 414 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 INSIG2Q9Y5U4 225 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 V9GYS6 101 aa11.51□□□□□ -0.57
PDLIM2-213ENST00000448520 TRBV5-5A0A0J9YX44 114 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 A8MXK9 166 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 CCRL2O00421 344 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 DHRS3O75911 302 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 GADD45AP24522 165 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 MDH2P40926 338 aaKnown RBP11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 FABP5Q01469 135 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 PRR31Q5SQ13 230 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM91Q6ZNR0 172 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 Q6ZR03 302 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 FGGYQ96C11 551 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 YIPF6Q96EC8 236 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 OR51E2Q9H255 320 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms