RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
SNHG4-201ENST00000448190 FKBP14Q9NWM8 211 aa11.17□□□□□ -0.62
SNHG4-201ENST00000448190 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
SNHG4-201ENST00000448190 SLC7A11Q9UPY5 501 aa11.17□□□□□ -0.62
SNHG4-201ENST00000448190 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 TRAV38-1A0A0B4J264 116 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 IGKV1-9A0A0C4DH69 117 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 A0A1B0GW55 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 PQLC2LA1A4F0 135 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 OR5B21A6NL26 309 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DHRS7CA6NNS2 312 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 TRAPPC2LH3BP13 241 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
SNHG4-201ENST00000448190 OGG1O15527 345 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 ADAM20O43506 726 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L2P0CJ85 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L3P0CJ86 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L4P0CJ87 422 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L5P0CJ88 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L6P0CJ89 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L7P0CJ90 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 HOXB4P17483 251 aaPredicted RBP11.16□□□□□ -0.62
SNHG4-201ENST00000448190 HSPA13P48723 471 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 TGM4P49221 684 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 MED21Q13503 144 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 FAM120AOSQ5T036 256 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 RPL22L1Q6P5R6 122 aaKnown RBP11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4L9Q6RFH8 374 aaPredicted RBP11.16□□□□□ -0.62
SNHG4-201ENST00000448190 RNF144BQ7Z419 303 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 CALHM1Q8IU99 346 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 OR52N1Q8NH53 320 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 AQP3Q92482 292 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 RGP1Q92546 391 aaPredicted RBP11.16□□□□□ -0.62
SNHG4-201ENST00000448190 ITFG2Q969R8 447 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 BEX2Q9BXY8 128 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 COMMD4Q9H0A8 199 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 DUX4Q9UBX2 424 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 MIOXQ9UGB7 285 aa11.16□□□□□ -0.62
SNHG4-201ENST00000448190 ABCA1O95477 2261 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 IGKV1-27A0A075B6S5 117 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 TMEM212A6NML5 194 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 F5H0A9 414 aaPredicted RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 CRLF1O75462 422 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 CDK1P06493 297 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ZNF12P17014 697 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ATF1P18846 271 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 CDK5R1Q15078 307 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 MICBQ29980 383 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ESCO2Q56NI9 601 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 DCDC5Q6ZRR9 648 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ZNF573Q86YE8 665 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 NANOGP1Q8N7R0 232 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ZNF485Q8NCK3 441 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 OR13C5Q8NGS8 318 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ZNF671Q8TAW3 534 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 GHSRQ92847 366 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 MYDGFQ969H8 173 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 RFT1Q96AA3 541 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 ORAI1Q96D31 301 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 NEIL1Q96FI4 390 aaPredicted RBP11.15□□□□□ -0.62
SNHG4-201ENST00000448190 SPACA5Q96QH8 159 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 CCDC90BQ9GZT6 254 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 SHARPINQ9H0F6 387 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 DNAJB11Q9UBS4 358 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 RAB26Q9ULW5 256 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 DHDHQ9UQ10 334 aa11.15□□□□□ -0.62
SNHG4-201ENST00000448190 FN1P02751 2386 aaKnown RBP11.14□□□□□ -0.63
SNHG4-201ENST00000448190 CR1P17927 2039 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 TRAV20A0A0B4J274 112 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 KIAA1324LA8MWY0 1029 aaPredicted RBP11.14□□□□□ -0.63
SNHG4-201ENST00000448190 MYL12BO14950 172 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 GATBO75879 557 aaKnown RBP11.14□□□□□ -0.63
SNHG4-201ENST00000448190 AVPP01185 164 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OCM2P0CE71 109 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OCMP0CE72 109 aaPredicted RBP11.14□□□□□ -0.63
SNHG4-201ENST00000448190 CALCBP10092 127 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 GLRA1P23415 457 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 CFHR2P36980 270 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 GABRA2P47869 451 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 PITPNBP48739 271 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 FUT6P51993 359 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 MTCP1P56278 107 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 GNB2P62879 340 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 CCDC58Q4VC31 144 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 DCAF12L2Q5VW00 463 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OR8B3Q8NGG8 313 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OR13C9Q8NGT0 318 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OR10Z1Q8NGY1 313 aa11.14□□□□□ -0.63
SNHG4-201ENST00000448190 OR8B2Q96RD0 313 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms