RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OR2AT4A6NND4 320 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ZNF670-ZNF695F2Z2N8 137 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 H0YAE9 185 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SLC1A7O00341 560 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ACOT8O14734 319 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 NPFFO15130 113 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SIGLEC5O15389 551 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 GPR137BO60478 399 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SERPINA3P01011 423 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SFTPBP07988 381 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 FCGR1AP12314 374 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 NDUFB7P17568 137 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CAPZA1P52907 286 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 LGALS4P56470 323 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 EGR3Q06889 387 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 IKZF1Q13422 519 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 APOFQ13790 326 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 AANATQ16613 207 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 SMIM21Q3B7S5 101 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 MIDNQ504T8 468 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ZNF788Q6ZQV5 615 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 GID4Q8IVV7 300 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 C10orf67Q8IYJ2 551 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 ZNF561Q8N587 486 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 IQCF1Q8N6M8 205 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 OR5K1Q8NHB7 308 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CCDC124Q96CT7 223 aaKnown RBP6.41□□□□□ -1.38
CD44-211ENST00000442151 OSBPL10Q9BXB5 764 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 CHIAQ9BZP6 476 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 MMP27Q9H306 513 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 MED20Q9H944 212 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 NEK6Q9HC98 313 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 TVP23BQ9NYZ1 205 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 IKZF2Q9UKS7 526 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 LRP12Q9Y561 859 aa6.41□□□□□ -1.38
CD44-211ENST00000442151 DHRS7CA6NNS2 312 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 DLGAP1O14490 977 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 SELENOFO60613 162 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 FKBP6O75344 327 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 DNAJC8O75937 253 aaPredicted RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 CLPXO76031 633 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 NRASP01111 189 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 GYS2P54840 703 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 ROM1Q03395 351 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 TMED1Q13445 227 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 CLVS2Q5SYC1 327 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 MEPCEQ7L2J0 689 aaKnown RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 TRPM8Q7Z2W7 1104 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 ZSCAN4Q8NAM6 433 aaPredicted RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 OR8B12Q8NGG6 310 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 ANGPTL6Q8NI99 470 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 RPL3LQ92901 407 aaKnown RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 MRPL48Q96GC5 212 aaKnown RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 CLPTM1LQ96KA5 538 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 CNN2Q99439 309 aaKnown RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 PBOV1Q9GZY1 135 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 OR51I2Q9H344 312 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 TCF7L1Q9HCS4 588 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 KRT84Q9NSB2 600 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 VNN3Q9NY84 501 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 NUFIP1Q9UHK0 495 aaKnown RBP6.4□□□□□ -1.38
CD44-211ENST00000442151 SNX5Q9Y5X3 404 aa6.4□□□□□ -1.38
CD44-211ENST00000442151 A0A0U1RQK1 487 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 MDFIC2A0A1B0GVS7 189 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 LOC110117498-PIK3R3F6TDL0 507 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 AKR7A2O43488 359 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
CD44-211ENST00000442151 DHRS3O75911 302 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 CYB5AP00167 134 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 OMGP23515 440 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 FASP25445 335 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 GPM6AP51674 278 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 ERVFRD-1P60508 538 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 CSNK2BP67870 215 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 TAF9Q16594 264 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 BCL2L15Q5TBC7 163 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 PLCXD3Q63HM9 321 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 WFDC12Q8WWY7 111 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 SDSLQ96GA7 329 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 OR8B4Q96RC9 309 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 CITED1Q99966 193 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 GLS2Q9UI32 602 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 VPREB3Q9UKI3 123 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 PIGLQ9Y2B2 252 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 TCRBV3S1A0A5B6 114 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 MEIOCA2RUB1 952 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 G3V2T6 193 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 RNASEK-C17orf49H0YIS7 233 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 J3QT63 122 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 DYNC1I1O14576 645 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 GATBO75879 557 aaKnown RBP6.39□□□□□ -1.39
CD44-211ENST00000442151 TSPAN9O75954 239 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 KRT8P05787 483 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 CHRM2P08172 466 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 T-ENOLP0DO92 83 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 ATP6V1E1P36543 226 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 HNRNPA0Q13151 305 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms