RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 LAMP3Q9UQV4 416 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 POLDIP2Q9Y2S7 368 aa10.76□□□□□ -0.69
SCLT1-202ENST00000439369 SPTAN1Q13813 2472 aaKnown RBP10.76□□□□□ -0.69
SCLT1-202ENST00000439369 ICE1Q9Y2F5 2266 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 IGKV1-27A0A075B6S5 117 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 A0A0G2JK05 382 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 LOC100289279A0A1B0GTE1 492 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 IFITM5A6NNB3 132 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 AIPO00170 330 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 CYB5AP00167 134 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 RPS19P39019 145 aaKnown RBP10.75□□□□□ -0.69
SCLT1-202ENST00000439369 SCAND1P57086 179 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF154Q13106 437 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 PDZK1IP1Q13113 114 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF181Q2M3W8 571 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 WDR86Q86TI4 376 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 MKXQ8IYA7 352 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 JAGN1Q8N5M9 183 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 PXT1Q8NFP0 134 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 OR10Z1Q8NGY1 313 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 NDNFQ8TB73 568 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 TRMT10AQ8TBZ6 339 aaKnown RBP10.75□□□□□ -0.69
SCLT1-202ENST00000439369 Q8TCH9 128 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 NPRL2Q8WTW4 380 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 HPS1Q92902 700 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
SCLT1-202ENST00000439369 GPER1Q99527 375 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 GFI1Q99684 422 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 CCL19Q99731 98 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 CACNG6Q9BXT2 260 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 SAP30LQ9HAJ7 183 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 PCDHB16Q9NRJ7 776 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 DECR2Q9NUI1 292 aa10.75□□□□□ -0.69
SCLT1-202ENST00000439369 CCDC59Q9P031 241 aaKnown RBP10.75□□□□□ -0.69
SCLT1-202ENST00000439369 AK6Q9Y3D8 172 aaKnown RBP10.75□□□□□ -0.69
SCLT1-202ENST00000439369 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 NOS1APO75052 506 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-202ENST00000439369 PAX1P15863 534 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 HTR2CP28335 458 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 SOX6P35712 828 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 PTGFRP43088 359 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 HAAOP46952 286 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 RORCP51449 518 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 BMXP51813 675 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 ZP1P60852 638 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 GPR176Q14439 515 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 SPCS2Q15005 226 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 FOXB2Q5VYV0 432 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF787Q6DD87 383 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 SFXN4Q6P4A7 337 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 CRIP3Q6Q6R5 217 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 Q8IYB0 196 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 OR11L1Q8NGX0 322 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF671Q8TAW3 534 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 DYNC2LI1Q8TCX1 351 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 AQP3Q92482 292 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-202ENST00000439369 VRK1Q99986 396 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-202ENST00000439369 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF701Q9NV72 531 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-202ENST00000439369 IL36GQ9NZH8 169 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 STEAP1Q9UHE8 339 aa10.74□□□□□ -0.69
SCLT1-202ENST00000439369 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 ABCA4P78363 2273 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 LRRC30A6NM36 301 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 TPD52L2O43399 206 aaKnown RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 BPNT1O95861 308 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 GRPP07492 148 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 TGFBR1P36897 503 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 OR10A3P58181 314 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 CCL8P80075 99 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 MXD1Q05195 221 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 HNRNPA0Q13151 305 aaKnown RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 RAB11BQ15907 218 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 HAGHLQ6PII5 290 aaPredicted RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 NR2C2APQ86WQ0 139 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 Q8NFD4 153 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 ACOT12Q8WYK0 555 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 AP3S1Q92572 193 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 SLC25A28Q96A46 364 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 POM121Q96HA1 1249 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 TPK1Q9H3S4 243 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 CNTD2Q9H8S5 307 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 BARX1Q9HBU1 254 aaPredicted RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 GCM1Q9NP62 436 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 MYOZ1Q9NP98 299 aaPredicted RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 DLL4Q9NR61 685 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 FBLN5Q9UBX5 448 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 PPP1R3CQ9UQK1 317 aa10.73□□□□□ -0.69
SCLT1-202ENST00000439369 MRPS28Q9Y2Q9 187 aaKnown RBP10.73□□□□□ -0.69
SCLT1-202ENST00000439369 DOPEY2Q9Y3R5 2298 aa10.72□□□□□ -0.69
SCLT1-202ENST00000439369 A6NLC8 198 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms