RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TMEM225BP0DP42 221 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 SRMP19623 302 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 RAB3BP20337 219 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 THBS2P35442 1172 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 SERPINB10P48595 397 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PDLIM4P50479 330 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PSMD7P51665 324 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 MXD1Q05195 221 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF154Q13106 437 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 KISS1Q15726 138 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 UNQ9370/PRO34162Q6UXP9 181 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TMEM91Q6ZNR0 172 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 MKXQ8IYA7 352 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 OR51A2Q8NGJ7 313 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 OR5D18Q8NGL1 313 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF420Q8TAQ5 688 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 LRRC29Q8WV35 223 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TNFAIP8L1Q8WVP5 186 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 RPL3LQ92901 407 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 RAB1CQ92928 201 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TMIGD2Q96BF3 282 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 FOXRED1Q96CU9 486 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 YIPF6Q96EC8 236 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PIMREGQ9BSJ6 248 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 SMURF1Q9HCE7 757 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ING4Q9UNL4 249 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 USP9YO00507 2555 aaPredicted RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 CACNA1DQ01668 2161 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ARFGEF3Q5TH69 2177 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 TANC2Q9HCD6 1990 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 LOC100289279A0A1B0GTE1 492 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 TRIM64BA6NI03 449 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 OVOL3O00110 214 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 GPX5O75715 221 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 NCR1O76036 304 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 LY6HO94772 140 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 NXPH2O95156 264 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 IGHV4-39P01824 125 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 CSTBP04080 98 aaKnown RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ALDOBP05062 364 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 IGFBP3P17936 291 aaPredicted RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 GLRA1P23415 457 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 FGF9P31371 208 aaPredicted RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 CRYBB2P43320 205 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 GPR6P46095 362 aaPredicted RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 DSCR9P59020 149 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 MAB21L1Q13394 359 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 RSU1Q15404 277 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 AWAT2Q6E213 333 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 CD200R1LQ6Q8B3 271 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 SLC25A26Q70HW3 274 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ANGPTL5Q86XS5 388 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ANKRD13BQ86YJ7 626 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 SCCPDHQ8NBX0 429 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 OR52N4Q8NGI2 321 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 FAM168AQ92567 244 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 GSX2Q9BZM3 304 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 PKIBQ9C010 78 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 PCDHB16Q9NRJ7 776 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 TMEM106BQ9NUM4 274 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 RNF7Q9UBF6 113 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ITGB1BP2Q9UKP3 347 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 AK6Q9Y3D8 172 aaKnown RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 CHD3Q12873 2000 aaKnown RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 ABCA4P78363 2273 aa7.17□□□□□ -1.26
TRIM48-201ENST00000417545 FASNP49327 2511 aaKnown RBP7.17□□□□□ -1.26
TRIM48-201ENST00000417545 DYSFO75923 2080 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 TRAV1-2A0A0B4J238 106 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 IGKV1-9A0A0C4DH69 117 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 SMIM30A4D0T7 59 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 LYNX1G3V0Z9 82 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 PIN1P1O15428 100 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 SPRY1O43609 319 aaPredicted RBP7.16□□□□□ -1.26
TRIM48-201ENST00000417545 NDUFS7O75251 213 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 SC5DO75845 299 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 ALX3O95076 343 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 CDRT1O95170 752 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 CYB5R3P00387 301 aaPredicted RBP7.16□□□□□ -1.26
TRIM48-201ENST00000417545 LYNX1P0DP58 116 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 GATA4P43694 442 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 MTNR1BP49286 362 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 VBP1P61758 197 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 IL24Q13007 206 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 MPPED2Q15777 294 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 KCNJ8Q15842 424 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 RAB11BQ15907 218 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 SMIM21Q3B7S5 101 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF826PQ6ZT77 177 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 USP43Q70EL4 1123 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 WDR86Q86TI4 376 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 TPRA1Q86W33 373 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 Q8IYB0 196 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 LRRC75A-AS1Q8N1F1 130 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 BATF2Q8N1L9 274 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF525Q8N782 197 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 OR51F2Q8NH61 342 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 EMG1Q92979 244 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms