RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ZNF93P35789 620 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-201ENST00000404210 CFHR2P36980 270 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 RANBP1P43487 201 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 HAAOP46952 286 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 EFNA4P52798 201 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 VBP1P61758 197 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 MRPS11P82912 194 aaKnown RBP10.42□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF154Q13106 437 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF181Q2M3W8 571 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 SPRNQ5BIV9 151 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 DDI2Q5TDH0 399 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 CRIP3Q6Q6R5 217 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 WDR86Q86TI4 376 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 SCCPDHQ8NBX0 429 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF671Q8TAW3 534 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 Q8TCH9 128 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 NRGNQ92686 78 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 UQCC2Q9BRT2 126 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 PKIBQ9C010 78 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 AK6Q9Y3D8 172 aaKnown RBP10.42□□□□□ -0.74
LINC00339-201ENST00000404210 V9GY05 133 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 DYSFO75923 2080 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF701M0R085 212 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 CDIPTO14735 213 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 NCR1O76036 304 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 CDRT1O95170 752 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 IL1AP01583 271 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 COL8A2P25067 703 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 MPZP25189 248 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 PMELP40967 661 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 NCS1P62166 190 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 IL24Q13007 206 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 PDZK1IP1Q13113 114 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 RIN1Q13671 783 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 MPPED2Q15777 294 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 PRAMEF6Q5VXH4 476 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 RNF144BQ7Z419 303 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 ANGPTL5Q86XS5 388 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 PNLDC1Q8NA58 520 aaKnown RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 ZSCAN4Q8NAM6 433 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 AQP3Q92482 292 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 RDH5Q92781 318 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 NINJ1Q92982 152 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 LURAP1Q96LR2 239 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 SPACA5Q96QH8 159 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 GPER1Q99527 375 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 GFI1Q99684 422 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 METTL17Q9H7H0 456 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 DLL4Q9NR61 685 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 BEX4Q9NWD9 120 aaPredicted RBP10.41□□□□□ -0.74
LINC00339-201ENST00000404210 PPP1R3CQ9UQK1 317 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 CACNA1DQ01668 2161 aa10.41□□□□□ -0.74
LINC00339-201ENST00000404210 IGHV1-69-2A0A0G2JMI3 117 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 A6NHS1 94 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 J3QT63 122 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 SLC22A1O15245 554 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 NOL3O60936 208 aaKnown RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 TMEM127O75204 238 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 TGFBR1P36897 503 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 RPS19P39019 145 aaKnown RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 PTGFRP43088 359 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 SERPINB10P48595 397 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 ZP1P60852 638 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 HAGHLQ6PII5 290 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 ASCL4Q6XD76 172 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 MOGAT3Q86VF5 341 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 CALHM1Q8IU99 346 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 SAXO1Q8IYX7 474 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 JAGN1Q8N5M9 183 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 OR11L1Q8NGX0 322 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 ISOC1Q96CN7 298 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 GSX2Q9BZM3 304 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 CNTD2Q9H8S5 307 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 BARX1Q9HBU1 254 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 MYOZ1Q9NP98 299 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 UFSP2Q9NUQ7 469 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 C1orf123Q9NWV4 160 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 RNF7Q9UBF6 113 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
LINC00339-201ENST00000404210 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.74
LINC00339-201ENST00000404210 UTP20O75691 2785 aaKnown RBP10.39□□□□□ -0.75
LINC00339-201ENST00000404210 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 CCDC160A6NGH7 325 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 A6NLC8 198 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 SLC17A2O00624 439 aa10.39□□□□□ -0.75
LINC00339-201ENST00000404210 SYNGR1O43759 233 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms