RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 BCL2L11O43521 198 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 CSTBP04080 98 aaKnown RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 SP9P0CG40 484 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 PRKACBP22694 351 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 CHRFAM7AQ494W8 412 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 TMEM164Q5U3C3 297 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 AADACL3Q5VUY0 350 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 Q96M66 194 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 CDC6Q99741 560 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 VRK1Q99986 396 aaPredicted RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 FAM173AQ9BQD7 235 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 GPR87Q9BY21 358 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 ZNF701Q9NV72 531 aaPredicted RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 PLEKHJ1Q9NW61 149 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 OSGIN2Q9Y236 505 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 C13orf42A0A1B0GVH6 325 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 RNF222A6NCQ9 220 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 MFSD2BA6NFX1 497 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 TECTAO75443 2155 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 NEURL1O76050 574 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 HTR3BO95264 441 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SFT2D2O95562 160 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SERPINA5P05154 406 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SERPINF1P36955 418 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 RBP2P50120 134 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 BAMBIQ13145 260 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 RSU1Q15404 277 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 SDK2Q58EX2 2172 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 ABHD17BQ5VST6 288 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 PLXDC2Q6UX71 529 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 CLEC18BQ6UXF7 455 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 OVCH2Q7RTZ1 564 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 TMEM45BQ96B21 275 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 BORCS8Q96FH0 119 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 NMES1Q9C002 83 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 WNT5BQ9H1J7 359 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 RGCCQ9H4X1 137 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 NARFLQ9H6Q4 476 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 ZNF703Q9H7S9 590 aaPredicted RBP12.06□□□□□ -0.48
PRAME-202ENST00000398743 B4GALT7Q9UBV7 327 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
PRAME-202ENST00000398743 ZDBF2Q9HCK1 2354 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 C21orf140B9A014 251 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 CRHP06850 196 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 NKAPLQ5M9Q1 402 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 LHFPL2Q6ZUX7 228 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 SKA3Q8IX90 412 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 INO80EQ8NBZ0 244 aaPredicted RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 SIGLEC12Q96PQ1 595 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 RTBDNQ9BSG5 229 aaPredicted RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 ABI3Q9P2A4 366 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 SPRY1O43609 319 aaPredicted RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 ANGPTL7O43827 346 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 NRASP01111 189 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 PI3P19957 117 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 PSMB6P28072 239 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 PRSS12P56730 875 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 NRN1LQ496H8 165 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 OR1S1Q8NH92 325 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 FGFBP3Q8TAT2 258 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 SLC25A32Q9H2D1 315 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 MBD2Q9UBB5 411 aa12.05□□□□□ -0.48
PRAME-202ENST00000398743 MCTS1Q9ULC4 181 aaKnown RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
PRAME-202ENST00000398743 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 A0A0B4J2A0 478 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 FIGNL2A6NMB9 653 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 M0R296 226 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
PRAME-202ENST00000398743 PLATP00750 562 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 RFC3P40938 356 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
PRAME-202ENST00000398743 ARPC4P59998 168 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
PRAME-202ENST00000398743 SURF2Q15527 256 aaPredicted RBP12.04□□□□□ -0.48
PRAME-202ENST00000398743 BEX5Q5H9J7 111 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 TMEM42Q69YG0 159 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
PRAME-202ENST00000398743 C1QTNF6Q9BXI9 259 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 RAB18Q9NP72 206 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 SHPKQ9UHJ6 478 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 KCNMB2Q9Y691 235 aa12.04□□□□□ -0.48
PRAME-202ENST00000398743 IGKV3D-15A0A087WSY6 115 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms