RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 KIR3DL2P43630 455 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 PSG4Q00888 419 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 Q499Y3 187 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 CCDC92Q53HC0 331 aaPredicted RBP15.68■□□□□ 0.1
SNCB-202ENST00000393693 RFPL4BQ6ZWI9 263 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 SIGLECL1Q8N7X8 197 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 MCFD2Q8NI22 146 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 DCLRE1CQ96SD1 692 aaKnown RBP15.68■□□□□ 0.1
SNCB-202ENST00000393693 ZNF747Q9BV97 191 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 SLITRK2Q9H156 845 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 PNRC2Q9NPJ4 139 aaKnown RBP15.68■□□□□ 0.1
SNCB-202ENST00000393693 MMP26Q9NRE1 261 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 SNTG1Q9NSN8 517 aa15.68■□□□□ 0.1
SNCB-202ENST00000393693 EIF3KQ9UBQ5 218 aaKnown RBP15.68■□□□□ 0.1
SNCB-202ENST00000393693 PLSCR5A0PG75 271 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 TMPRSS2O15393 492 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 DOK2O60496 412 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 NGFP01138 241 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 UCHL1P09936 223 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 GATA3P23771 443 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 CALRP27797 417 aaKnown RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 SDC2P34741 201 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 RPS19P39019 145 aaKnown RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 CX3CR1P49238 355 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 PRKXP51817 358 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 MFGE8Q08431 387 aaPredicted RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 ZNF404Q494X3 552 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 HSD17B12Q53GQ0 312 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 MBNL2Q5VZF2 373 aaKnown RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 CROCCP3Q8IVE0 287 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 DEFB108BQ8NET1 73 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 TSEN15Q8WW01 171 aaKnown RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 WNT5BQ9H1J7 359 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 MMP27Q9H306 513 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 MSL2Q9HCI7 577 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 FAM206AQ9NX38 181 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 NUFIP1Q9UHK0 495 aaKnown RBP15.67■□□□□ 0.1
SNCB-202ENST00000393693 WNK2Q9Y3S1 2297 aa15.67■□□□□ 0.1
SNCB-202ENST00000393693 TRAV1-2A0A0B4J238 106 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 TRBV5-5A0A0J9YX44 114 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 PDCD5O14737 125 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 ISG15P05161 165 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 CD2P06729 351 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OCM2P0CE71 109 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 HKR1P10072 659 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 TPTEP56180 551 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 RPS11P62280 158 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNCB-202ENST00000393693 MXD1Q05195 221 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 PRR31Q5SQ13 230 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 ELMOD2Q8IZ81 293 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OR13C5Q8NGS8 318 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OR1F12Q8NHA8 337 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 AP3S1Q92572 193 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 SLC25A46Q96AG3 418 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OR14A2Q96R54 314 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OR2H1Q9GZK4 316 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 EGLN1Q9GZT9 426 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 PBOV1Q9GZY1 135 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 ZNF69Q9UC07 566 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 ATPIF1Q9UII2 106 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 HHLA2Q9UM44 414 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 SLC22A13Q9Y226 551 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 TRRAPQ9Y4A5 3859 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 PKD1L1Q8TDX9 2849 aa15.66■□□□□ 0.1
SNCB-202ENST00000393693 OR6C6A6NF89 314 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 TRAPPC2LH3BP13 241 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 ANXA2P07355 339 aaKnown RBP15.65■□□□□ 0.1
SNCB-202ENST00000393693 CFL1P23528 166 aaKnown RBP15.65■□□□□ 0.1
SNCB-202ENST00000393693 SEC61A1P61619 476 aaKnown RBP15.65■□□□□ 0.1
SNCB-202ENST00000393693 PPP1CBP62140 327 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 FOXL1Q12952 345 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 INSL4Q14641 139 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 BCL6BQ8N143 479 aaPredicted RBP15.65■□□□□ 0.1
SNCB-202ENST00000393693 PGAM5Q96HS1 289 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 SLIRPQ9GZT3 109 aaKnown RBP15.65■□□□□ 0.1
SNCB-202ENST00000393693 BRD7Q9NPI1 651 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 DHDHQ9UQ10 334 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 NPTNQ9Y639 398 aa15.65■□□□□ 0.1
SNCB-202ENST00000393693 A0A075B6Q4 140 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 A0A1B0GVI7 797 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 F5H5K5 113 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 M0R135 149 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 FOXH1O75593 365 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 IGHV2-70P01814 119 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 ADH4P08319 380 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 COX5BP10606 129 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 ZNF12P17014 697 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 S100A5P33763 92 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 HTR5AP47898 357 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 ZNF121P58317 390 aaPredicted RBP15.64■□□□□ 0.09
SNCB-202ENST00000393693 ODF4Q2M2E3 257 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 TUSC1Q2TAM9 212 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 KLF17Q5JT82 389 aaPredicted RBP15.64■□□□□ 0.09
SNCB-202ENST00000393693 ZNF774Q6NX45 483 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 SHISA2Q6UWI4 295 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 DRAM2Q6UX65 266 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 RBMS3Q6XE24 437 aaKnown RBP15.64■□□□□ 0.09
SNCB-202ENST00000393693 CCDC54Q8NEL0 328 aa15.64■□□□□ 0.09
SNCB-202ENST00000393693 RGP1Q92546 391 aaPredicted RBP15.64■□□□□ 0.09
SNCB-202ENST00000393693 TAF15Q92804 592 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms