RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 PNPP00491 289 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 RPA2P15927 270 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 RPL12P30050 165 aaKnown RBP6.39□□□□□ -1.39
CCDC171-201ENST00000380701 RFC3P40938 356 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 RAG2P55895 527 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 LSMEM1Q8N8F7 131 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 STXBP6Q8NFX7 210 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 OR2M7Q8NG81 312 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF596Q8TC21 504 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 IL36GQ9NZH8 169 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 MTCH1Q9NZJ7 389 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
CCDC171-201ENST00000380701 PCDHGA9Q9Y5G4 932 aaKnown RBP6.39□□□□□ -1.39
CCDC171-201ENST00000380701 IGHV3-15A0A0B4J1V0 119 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM235A6NFC5 223 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 OOEPA6NGQ2 149 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 DNASE2O00115 360 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ANGPTL7O43827 346 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 B4GALT3O60512 393 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 NME2P22392 152 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 EPHA2P29317 976 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ERVFRD-1P60508 538 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF528Q3MIS6 628 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 DRAXINQ8NBI3 349 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 OR52I2Q8NH67 350 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ERGIC1Q969X5 290 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TEX37Q96LM6 180 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 COL18A1P39060 1754 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TCRBV5S2A0A599 114 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 LIPT2A6NK58 231 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 POLR2IP36954 125 aaKnown RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 CD200P41217 278 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 HCCSP53701 268 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ADIRFQ15847 76 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 OR2T2Q6IF00 324 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 MRM1Q6IN84 353 aaKnown RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TCTEX1D1Q8N7M0 179 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 WNT2BQ93097 391 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 HGDQ93099 445 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 CMBLQ96DG6 245 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 SEC22AQ96IW7 307 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 CHRNA10Q9GZZ6 450 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PUS1Q9Y606 427 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 SLC2A10O95528 541 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PTGFRP43088 359 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 COMPP49747 757 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PIGPP57054 158 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 KLRB1Q12918 225 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ZBTB37Q5TC79 503 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 SLC23A3Q6PIS1 610 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF793Q6ZN11 406 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 VASH2Q86V25 355 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 LINC01555Q8NAE3 123 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 CCL17Q92583 94 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 GDF15Q99988 308 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 RHNO1Q9BSD3 238 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 UQCC1Q9NVA1 299 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 IL19Q9UHD0 177 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 NPTNQ9Y639 398 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 LAMB1P07942 1786 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 FHL5Q5TD97 284 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 DGAT2L6Q6ZPD8 337 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PRR7Q8TB68 274 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 DNASE2BQ8WZ79 361 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 MYEOVQ96EZ4 313 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF71Q9NQZ8 489 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PRNDQ9UKY0 176 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 SPAARA0A1B0GVQ0 90 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TFAP2AP05549 437 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 LIFP15018 202 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 EVX1P49640 407 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 CDC20Q12834 499 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TESK1Q15569 626 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 KISS1Q15726 138 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 FAHD2BQ6P2I3 314 aaPredicted RBP6.38□□□□□ -1.39
CCDC171-201ENST00000380701 C20orf196Q8IYI0 205 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM104Q8NE00 496 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 OR5A2Q8NGI9 324 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 FAHD2AQ96GK7 314 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PTDSS2Q9BVG9 487 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 TPPP3Q9BW30 176 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 PRR14Q9BWN1 585 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 GHITMQ9H3K2 345 aa6.38□□□□□ -1.39
CCDC171-201ENST00000380701 SEC14L6B5MCN3 397 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 SDCBPO00560 298 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-201ENST00000380701 PRF1P14222 555 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 HIST1H1DP16402 221 aaKnown RBP6.37□□□□□ -1.39
CCDC171-201ENST00000380701 MMP15P51511 669 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-201ENST00000380701 BHLHA9Q7RTU4 235 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 SUMF1Q8NBK3 374 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF416Q9BWM5 594 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 SP9P0CG40 484 aa6.37□□□□□ -1.39
CCDC171-201ENST00000380701 G0S2P27469 103 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms