RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 SRRM5B3KS81 715 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 LGALS8O00214 317 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 NDUFA2O43678 99 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 CD5LO43866 347 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 ATF1P18846 271 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 GPR50Q13585 617 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 ZNF404Q494X3 552 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 LRRC29Q8WV35 223 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 RGP1Q92546 391 aaPredicted RBP11.11□□□□□ -0.63
CKAP2-202ENST00000378034 SPSB1Q96BD6 273 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 ZCCHC4Q9H5U6 513 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 PCDHB10Q9UN67 800 aa11.11□□□□□ -0.63
CKAP2-202ENST00000378034 LY6G6DO95868 133 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 MUC1P15941 1255 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 CELP19835 753 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 IL2RGP31785 369 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 MED22Q15528 200 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 LINC01356Q8N9X3 169 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 AQP3Q92482 292 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 THRSPQ92748 146 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 BORCS8Q96FH0 119 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 PKIBQ9C010 78 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 PATZ1Q9HBE1 687 aaKnown RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 MIOXQ9UGB7 285 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 POLDIP2Q9Y2S7 368 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 B4DSR2 109 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 J3QT63 122 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 ACAA1P09110 424 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 OCM2P0CE71 109 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 MPZP25189 248 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 HAAOP46952 286 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 RBP2P50120 134 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 ATP1B3P54709 279 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 KRTAP1-1Q07627 177 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 HNRNPA0Q13151 305 aaKnown RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 TBCEQ15813 527 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 Q499Y3 187 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 HAGHLQ6PII5 290 aaPredicted RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 DCDC5Q6ZRR9 648 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 C12orf43Q96C57 262 aaKnown RBP11.1□□□□□ -0.63
CKAP2-202ENST00000378034 OR5M11Q96RB7 305 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 SMR3AQ99954 134 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 TMEM246Q9BRR3 403 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 RASL12Q9NYN1 266 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 LRRC42Q9Y546 428 aa11.1□□□□□ -0.63
CKAP2-202ENST00000378034 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 FAM230AA0A1W2PPH8 454 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 OCMP0CE72 109 aaPredicted RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 AZGP1P25311 298 aaKnown RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 IL24Q13007 206 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 MICBQ29980 383 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 FAM201AQ5SY85 155 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 TRMT10AQ8TBZ6 339 aaKnown RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
CKAP2-202ENST00000378034 MSI2Q96DH6 328 aaKnown RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 METTL17Q9H7H0 456 aaPredicted RBP11.09□□□□□ -0.63
CKAP2-202ENST00000378034 CEACAM18A8MTB9 384 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 F5H0A9 414 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 SULT1B1O43704 296 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF205O95201 554 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 CD80P33681 288 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 RPS11P62280 158 aaKnown RBP eCLIP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF529Q6P280 563 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 OR13C9Q8NGT0 318 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 CPNE2Q96FN4 548 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 OPALINQ96PE5 141 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 GSX1Q9H4S2 264 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 RHBDL1O75783 438 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 WNT2P09544 360 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 EGR1P18146 543 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 RAB3AP20336 220 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 SOX2P48431 317 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 MLLT11Q13015 90 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 TPBGQ13641 420 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 DOC2BQ14184 412 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 SFRP4Q6FHJ7 346 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-202ENST00000378034 NLRC3Q7RTR2 1065 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF367Q7RTV3 350 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 POC1AQ8NBT0 407 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 NPRL2Q8WTW4 380 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 UFD1Q92890 307 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms