RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CDIPTO14735 213 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 GPX5O75715 221 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 IGHV2-70P01814 119 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 FSTP19883 344 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 PSMA1P25786 263 aaKnown RBP12.63□□□□□ -0.39
HSPG2-201ENST00000374673 MAPK3P27361 379 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-201ENST00000374673 RBMXP38159 391 aaKnown RBP12.63□□□□□ -0.39
HSPG2-201ENST00000374673 SSX1Q16384 188 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 UNQ9370/PRO34162Q6UXP9 181 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 LHFPL2Q6ZUX7 228 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 GCSAMQ8N6F7 178 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 NPRL2Q8WTW4 380 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 DERL3Q96Q80 235 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 TMED9Q9BVK6 235 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 TAS2R4Q9NYW5 299 aa12.63□□□□□ -0.39
HSPG2-201ENST00000374673 IGKV1-27A0A075B6S5 117 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 FAM230AA0A1W2PPH8 454 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 hCG_1807616A0A1W2PRN6 198 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 TRIM64CA6NLI5 447 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 RNF223E7ERA6 249 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 J3QT63 122 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 INMTO95050 263 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 LHBP01229 141 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 IGFBP3P17936 291 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-201ENST00000374673 RAB3AP20336 220 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 MPZP25189 248 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 PSMB9P28065 219 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 GABRA5P31644 462 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 HAAOP46952 286 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 RBP2P50120 134 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 ATP1B3P54709 279 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 BTG1P62324 171 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 RPS25P62851 125 aaKnown RBP12.62□□□□□ -0.39
HSPG2-201ENST00000374673 LOXL1Q08397 574 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-201ENST00000374673 ACSM3Q53FZ2 586 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 SYT6Q5T7P8 510 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-201ENST00000374673 HAGHLQ6PII5 290 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-201ENST00000374673 LRRC29Q8WV35 223 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 AQP3Q92482 292 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 PKIBQ9C010 78 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
HSPG2-201ENST00000374673 YLPM1P49750 1951 aaKnown RBP12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 IGHV4-61A0A0C4DH41 118 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 SRRM5B3KS81 715 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 H7C1Q1 480 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 CCRL2O00421 344 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PIN1P1O15428 100 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 RHBDL1O75783 438 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 OCMP0CE72 109 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PPP3R1P63098 170 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 ZMYND11Q15326 602 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 TMEM155Q4W5P6 130 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 OR51A2Q8NGJ7 313 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 ZNF671Q8TAW3 534 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 METTL17Q9H7H0 456 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-201ENST00000374673 CKLFQ9UBR5 152 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 POLDIP2Q9Y2S7 368 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
HSPG2-201ENST00000374673 WNT9BO14905 357 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 SYNGR1O43759 233 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 RGS9O75916 674 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 ALDOBP05062 364 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 HCKP08631 526 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 EGR1P18146 543 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TGFBR2P37173 567 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 MTCP1P56278 107 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 IL24Q13007 206 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 INSL4Q14641 139 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 NEDD8Q15843 81 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 FAM201AQ5SY85 155 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TEX36Q5VZQ5 186 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 CRIP3Q6Q6R5 217 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TMEM91Q6ZNR0 172 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 LRRC28Q86X40 367 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 ANGPTL5Q86XS5 388 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-201ENST00000374673 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 PHYHIPQ92561 330 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TMEM203Q969S6 136 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 MUL1Q969V5 352 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 COX4I2Q96KJ9 171 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 VCX3AQ9NNX9 186 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
HSPG2-201ENST00000374673 VPS13CQ709C8 3753 aa12.59□□□□□ -0.39
HSPG2-201ENST00000374673 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms