RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 PRSS54Q6PEW0 395 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 DEGS2Q6QHC5 323 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 ZNF704Q6ZNC4 412 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 JAGN1Q8N5M9 183 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 CMSS1Q9BQ75 279 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 MYEF2Q9P2K5 600 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 GTF2A1LQ9UNN4 478 aa11.13□□□□□ -0.63
RTFDC1-202ENST00000357348 IGLV3-32A0A0A0MS00 114 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 LRRC3CA6NJW4 275 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 SSX5O60225 188 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 BPNT1O95861 308 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 GDF1P27539 372 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 HRH1P35367 487 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 GFOD2Q3B7J2 385 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 OR52W1Q6IF63 320 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 KCTD9Q7L273 389 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 OR2M7Q8NG81 312 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 CASTOR1Q8WTX7 329 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 FOXN4Q96NZ1 517 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 OR52A1Q9UKL2 312 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 A0A1W2PNR3 127 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 C5orf51A6NDU8 294 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 C1QTNF9BB2RNN3 333 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 KCNAB3O43448 404 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 CBR3O75828 277 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 CD5P06127 495 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 SP1P08047 785 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 ACAA1P09110 424 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 C1QTNF9P0C862 333 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 PLA2G5P39877 138 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 SOX8P57073 446 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 IL15RAQ13261 267 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 SLC22A6Q4U2R8 563 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 WIPI1Q5MNZ9 446 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 OR14L1PQ8NHC6 308 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 RHOFQ9HBH0 211 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 DNAJB11Q9UBS4 358 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 GPR132Q9UNW8 380 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 BSNQ9UPA5 3926 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 SVILO95425 2214 aa11.12□□□□□ -0.63
RTFDC1-202ENST00000357348 A8MVM7 634 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 RRP8O43159 456 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 ZIC3O60481 467 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 EIF3GO75821 320 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 CELA3AP09093 270 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 VAMP1P23763 118 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 DSCR4P56555 118 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 PMP22Q01453 160 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 FOXO1Q12778 655 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 ECH1Q13011 328 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 HABP2Q14520 560 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 TSC22D1Q15714 1073 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 SGCAQ16586 387 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 VAX1Q5SQQ9 334 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 ZNF529Q6P280 563 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 KDM8Q8N371 416 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 ST7LQ8TDW4 575 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM230Q96A57 120 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 EMC9Q9Y3B6 208 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 CACNA1AO00555 2505 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 FAM157AC9JC47 383 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 K7EM74 188 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 OR2T1O43869 369 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 LMX1BO60663 402 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 SFT2D2O95562 160 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 CD46P15529 392 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 AKR1C4P17516 323 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 CRABP1P29762 137 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 APOBEC1P41238 236 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MAGEA5P43359 124 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MEOX1P50221 254 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 TLE3Q04726 772 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 PEG10Q86TG7 708 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 HAS2Q92819 552 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 CMBLQ96DG6 245 aa11.11□□□□□ -0.63
RTFDC1-202ENST00000357348 MRGPRX4Q96LA9 322 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms