RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MPPED2Q15777 294 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
SNCA-202ENST00000345009 Q499Y3 187 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 KCTD21Q4G0X4 260 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 PRAMEF6Q5VXH4 476 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 XAF1Q6GPH4 301 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 SPICQ8N5J4 248 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 DNAAF1Q8NEP3 725 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
SNCA-202ENST00000345009 RPS4Y2Q8TD47 263 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 SGCDQ92629 289 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 SPSB1Q96BD6 273 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ADAT3Q96EY9 351 aaPredicted RBP9.98□□□□□ -0.81
SNCA-202ENST00000345009 BORCS8Q96FH0 119 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 ZCCHC4Q9H5U6 513 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 VCX3AQ9NNX9 186 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 PCDHB10Q9UN67 800 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 POLDIP2Q9Y2S7 368 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 WIPI2Q9Y4P8 454 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 CACNG2Q9Y698 323 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 SIRT4Q9Y6E7 314 aaPredicted RBP9.98□□□□□ -0.81
SNCA-202ENST00000345009 TLN2Q9Y4G6 2542 aa9.98□□□□□ -0.81
SNCA-202ENST00000345009 PPIAL4EA0A075B759 164 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 TRAV38-1A0A0B4J264 116 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 FAM230AA0A1W2PPH8 454 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 PPIAL4DF5H284 164 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
SNCA-202ENST00000345009 NDUFA2O43678 99 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 CYB5AP00167 134 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 LALBAP00709 142 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 PPIAL4FP0DN26 164 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 ATF1P18846 271 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 RAB3AP20336 220 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 PSMA1P25786 263 aaKnown RBP9.97□□□□□ -0.81
SNCA-202ENST00000345009 THBS2P35442 1172 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 SOX2P48431 317 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 RBP2P50120 134 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 MTCP1P56278 107 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 PPP3R1P63098 170 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
SNCA-202ENST00000345009 SPRNQ5BIV9 151 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 ZNF773Q6PK81 442 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 LRRC28Q86X40 367 aaPredicted RBP9.97□□□□□ -0.81
SNCA-202ENST00000345009 ZFP41Q8N8Y5 198 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 SCCPDHQ8NBX0 429 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 OR51A4Q8NGJ6 313 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 OR10Z1Q8NGY1 313 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 HPSE2Q8WWQ2 592 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 TMEM106AQ96A25 262 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 RAB39BQ96DA2 213 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 OR5M11Q96RB7 305 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 MGLLQ99685 303 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 GAL3ST1Q99999 423 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 TLNRD1Q9H1K6 362 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 OR51I2Q9H344 312 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 ACOT13Q9NPJ3 140 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 LSM2Q9Y333 95 aaKnown RBP9.97□□□□□ -0.81
SNCA-202ENST00000345009 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
SNCA-202ENST00000345009 ABCA1O95477 2261 aa9.96□□□□□ -0.81
SNCA-202ENST00000345009 PQLC2LA1A4F0 135 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 CYB5R3P00387 301 aaPredicted RBP9.96□□□□□ -0.82
SNCA-202ENST00000345009 INHBBP09529 407 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 MUC1P15941 1255 aaPredicted RBP9.96□□□□□ -0.82
SNCA-202ENST00000345009 MAP2K4P45985 399 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 HAAOP46952 286 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 GZMKP49863 264 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 EMX1Q04741 257 aaPredicted RBP9.96□□□□□ -0.82
SNCA-202ENST00000345009 TPBGQ13641 420 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 UBE2V2Q15819 145 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 MICBQ29980 383 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 TMEM155Q4W5P6 130 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 AVPI1Q5T686 147 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 LIPKQ5VXJ0 399 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 HAGHLQ6PII5 290 aaPredicted RBP9.96□□□□□ -0.82
SNCA-202ENST00000345009 LHFPL2Q6ZUX7 228 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 MKXQ8IYA7 352 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 SPARTQ8N0X7 666 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 BOLLQ8N9W6 283 aaKnown RBP9.96□□□□□ -0.82
SNCA-202ENST00000345009 OR10AC1Q8NH08 325 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 COX4I2Q96KJ9 171 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 OPALINQ96PE5 141 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 PPP1R3EQ9H7J1 279 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 VPS13CQ709C8 3753 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 ZANQ9Y493 2812 aa9.96□□□□□ -0.82
SNCA-202ENST00000345009 MTORP42345 2549 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 A0A087WXM4 84 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 IGHV4-61A0A0C4DH41 118 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 TRBV5-5A0A0J9YX44 114 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 ZNF879B4DU55 563 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 J3QT63 122 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 LGALS8O00214 317 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 SULT1B1O43704 296 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 LMX1BO60663 402 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 HCKP08631 526 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 CPEP16870 476 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
SNCA-202ENST00000345009 PMELP40967 661 aa9.95□□□□□ -0.82
SNCA-202ENST00000345009 ARMCX4Q5H9R4 360 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms