RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 OR51A2Q8NGJ7 313 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 PGLYRP3Q96LB9 341 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 SLC7A11Q9UPY5 501 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF281Q9Y2X9 895 aa11.09□□□□□ -0.63
TUBD1-202ENST00000340993 OGG1O15527 345 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 SERPINA3P01011 423 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 IGHV2-70P01814 119 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 HCKP08631 526 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 CHN2P52757 468 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 SNU13P55769 128 aaKnown RBP11.08□□□□□ -0.64
TUBD1-202ENST00000340993 CCDC58Q4VC31 144 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 CLEC9AQ6UXN8 241 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 SATL1Q86VE3 508 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 CALHM1Q8IU99 346 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 C1orf87Q8N0U7 546 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 CELF2-AS1Q8N7Q2 184 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 GPR148Q8TDV2 347 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 HPS1Q92902 700 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 TMEM106AQ96A25 262 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 BORCS8Q96FH0 119 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 OR51I2Q9H344 312 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 A0A1B0GW55 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 PPIAL4DF5H284 164 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 SPRY1O43609 319 aaPredicted RBP11.08□□□□□ -0.64
TUBD1-202ENST00000340993 GATBO75879 557 aaKnown RBP11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L2P0CJ85 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L3P0CJ86 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L4P0CJ87 422 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L5P0CJ88 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L6P0CJ89 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L7P0CJ90 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 IGHV4-31P0DP07 118 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 ZNF12P17014 697 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 AZGP1P25311 298 aaKnown RBP11.08□□□□□ -0.64
TUBD1-202ENST00000340993 FAM27D1Q5T7N8 215 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 TMEM42Q69YG0 159 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4L9Q6RFH8 374 aaPredicted RBP11.08□□□□□ -0.64
TUBD1-202ENST00000340993 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 OR5A2Q8NGI9 324 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 SLAMF9Q96A28 289 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 ZNF665Q9H7R5 613 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DNAJB11Q9UBS4 358 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 DUX4Q9UBX2 424 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
TUBD1-202ENST00000340993 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 HIVEP2P31629 2446 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 PQLC2LA1A4F0 135 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 TMEM210A6NLX4 147 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 CEACAM18A8MTB9 384 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 PHF1O43189 567 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ANGPTL7O43827 346 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ATF1P18846 271 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 CEBPDP49716 269 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 MTCP1P56278 107 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 TAS2R43P59537 309 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 RPS25P62851 125 aaKnown RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 LCN2P80188 198 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 CNN3Q15417 329 aaKnown RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ASPHD2Q6ICH7 369 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 Q8TCH9 128 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 PP6455Q8WZ26 134 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 UFD1Q92890 307 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 MSI2Q96DH6 328 aaKnown RBP11.07□□□□□ -0.64
TUBD1-202ENST00000340993 TMEM246Q9BRR3 403 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 ZCCHC4Q9H5U6 513 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 TMEM165Q9HC07 324 aa11.07□□□□□ -0.64
TUBD1-202ENST00000340993 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 CUBNO60494 3623 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 NSD1Q96L73 2696 aaPredicted RBP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 OR5B21A6NL26 309 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 DHRS7CA6NNS2 312 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 TGFAP01135 160 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 RPS2P15880 293 aaKnown RBP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 PSMB9P28065 219 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 MDH2P40926 338 aaKnown RBP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 RPS11P62280 158 aaKnown RBP eCLIP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
TUBD1-202ENST00000340993 NEDD8Q15843 81 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 SLC25A26Q70HW3 274 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 RPS4Y2Q8TD47 263 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 AQP3Q92482 292 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 OPALINQ96PE5 141 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 FAM192AQ9GZU8 254 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 ABCB9Q9NP78 766 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 ACOT13Q9NPJ3 140 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
TUBD1-202ENST00000340993 OOEPA6NGQ2 149 aa11.05□□□□□ -0.64
TUBD1-202ENST00000340993 PTBP3O95758 552 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms