RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 NPIPB9F8W1W9 429 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 PHF1O43189 567 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-201ENST00000318607 SOX15O60248 233 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 GUSBP08236 651 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HKR1P10072 659 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
PABPC1-201ENST00000318607 TMEM11P17152 192 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 CX3CR1P49238 355 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 NKAIN1Q4KMZ8 207 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HPSE2Q8WWQ2 592 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 PRRX2Q99811 253 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
PABPC1-201ENST00000318607 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-201ENST00000318607 CARHSP1Q9Y2V2 147 aaKnown RBP12.54□□□□□ -0.4
PABPC1-201ENST00000318607 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 DHRS7CA6NNS2 312 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 FGF16O43320 207 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HLA-HP01893 362 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 S100A8P05109 93 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 OR5AC1P0C628 307 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 PET100P0DJ07 73 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF708P17019 499 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 BMP5P22003 454 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 PTGER4P35408 488 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HSF1Q00613 529 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 UNQ6494/PRO21346Q6UXR6 183 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 IL34Q6ZMJ4 242 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 ADAMTS17Q8TE56 1095 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 GPR173Q9NS66 373 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 AP4M1O00189 453 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 FOSL2P15408 326 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 SLC26A5P58743 744 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 ECH1Q13011 328 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 HOGA1Q86XE5 327 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 SLC26A1Q9H2B4 701 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 POLE3Q9NRF9 147 aa12.54□□□□□ -0.4
PABPC1-201ENST00000318607 NCOA6Q14686 2063 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-201ENST00000318607 PLPP3O14495 311 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 CDC14BO60729 498 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 IFNA17P01571 189 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 BGLAPP02818 100 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 OR2G3Q8NGZ4 309 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 RTBDNQ9BSG5 229 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-201ENST00000318607 TMPRSS5Q9H3S3 457 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 A8MVM7 634 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 WRBO00258 174 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
PABPC1-201ENST00000318607 TRGC2P03986 189 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 TAS2R31P59538 309 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SGCBQ16585 318 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 IZUMO4Q1ZYL8 232 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 MR1Q95460 341 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 KPTNQ9Y664 436 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 R4GN57 208 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF724A8MTY0 619 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SCGNO76038 276 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 DUSP1P28562 367 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 GAMTQ14353 236 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-201ENST00000318607 PYY3Q5JQD4 70 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 Q7L0L9 218 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 PRR18Q8N4B5 295 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 ZDHHC12Q96GR4 267 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 OR51M1Q9H341 326 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 LUZP4Q9P127 313 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 GPR179Q6PRD1 2367 aa12.53□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF726A6NNF4 738 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 SEMA4FO95754 770 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 GABRA4P48169 554 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 GPR157Q5UAW9 335 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 OR8B12Q8NGG6 310 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 OR52M1Q8NGK5 317 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 EDAQ92838 391 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 SNX22Q96L94 193 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 ATG101Q9BSB4 218 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 DOK5Q9P104 306 aa12.52□□□□□ -0.4
PABPC1-201ENST00000318607 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.4
PABPC1-201ENST00000318607 ABCA1O95477 2261 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-201ENST00000318607 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-201ENST00000318607 TMEM176BQ3YBM2 270 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-201ENST00000318607 C9orf135Q5VTT2 229 aa12.52□□□□□ -0.41
PABPC1-201ENST00000318607 ZNF880Q6PDB4 577 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms