RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GABREP78334 506 aa11.82□□□□□ -0.52
SKA3-202ENST00000314759 ACY1Q03154 408 aa11.82□□□□□ -0.52
SKA3-202ENST00000314759 PNRC2Q9NPJ4 139 aaKnown RBP11.82□□□□□ -0.52
SKA3-202ENST00000314759 A0A1W2PNV4 684 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 C5orf63A6NC05 138 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 HPNP05981 417 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 PGA4P0DJD7 388 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 PGA3P0DJD8 388 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 MYBPHQ13203 477 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 ZNF239Q16600 458 aaKnown RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 MIDNQ504T8 468 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 NSUN5P2Q63ZY6 315 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 FAM57BQ71RH2 274 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 C17orf82Q86X59 251 aaPredicted RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 DEFB119Q8N690 84 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 PFDN5Q99471 154 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 PISDQ9UG56 409 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 IGKV1D-8A0A087WSZ0 117 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 IFITM10A6NMD0 228 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 JTBO76095 146 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 GAPDHP04406 335 aaKnown RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 FOLR1P15328 257 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 CCL1P22362 96 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 GPX4P36969 197 aaPredicted RBP11.81□□□□□ -0.52
SKA3-202ENST00000314759 KISS1Q15726 138 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 CHRFAM7AQ494W8 412 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 CARD17Q5XLA6 110 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 Q6ZS52 159 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 NPRL2Q8WTW4 380 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 TMPRSS5Q9H3S3 457 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.81□□□□□ -0.52
SKA3-202ENST00000314759 C1orf123Q9NWV4 160 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 STARD10Q9Y365 291 aa11.81□□□□□ -0.52
SKA3-202ENST00000314759 DEDDO75618 318 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 THBS4P35443 961 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 PMELP40967 661 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 ARL4DP49703 201 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SULT1A1P50225 295 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 PYY3Q5JQD4 70 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 FBXO46Q6PJ61 603 aaPredicted RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 NOXO1Q8NFA2 376 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 BSCL2Q96G97 398 aaPredicted RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 PECRQ9BY49 303 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 C14orf166Q9Y224 244 aaKnown RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 MYO7BQ6PIF6 2116 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 MED12Q93074 2177 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 TSPAN15O95858 294 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SNCAP37840 140 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 ZNF84P51523 738 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SURF2Q15527 256 aaPredicted RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 DOK3Q7L591 496 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 UEVLDQ8IX04 471 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SEMA6DQ8NFY4 1073 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 OR9K2Q8NGE7 335 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 OR14K1Q8NGZ2 314 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 LIN37Q96GY3 246 aaPredicted RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 PRRX2Q99811 253 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 DMRT1Q9Y5R6 373 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 WRBO00258 174 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 C1QL1O75973 258 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 IGHG1P01857 330 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 OR1D5P58170 312 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 FAM3AP98173 230 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 GUK1Q16774 197 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 ZNF283Q8N7M2 679 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 APCDD1LQ8NCL9 501 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 FNDC9Q8TBE3 224 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 SHDQ96IW2 340 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 EIF5A2Q9GZV4 153 aaKnown RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
SKA3-202ENST00000314759 ZNF701Q9NV72 531 aaPredicted RBP11.8□□□□□ -0.52
SKA3-202ENST00000314759 A0A1B0GV50 99 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 SHISA7A6NL88 538 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 ZNF814B7Z6K7 855 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 SERPINA2P20848 420 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 SUMO3P55854 103 aaPredicted RBP11.79□□□□□ -0.52
SKA3-202ENST00000314759 CFHR1Q03591 330 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 LCN10Q6JVE6 187 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 SLC25A47Q6Q0C1 308 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 TUBD1Q9UJT1 453 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 LSM5Q9Y4Y9 91 aaKnown RBP11.79□□□□□ -0.52
SKA3-202ENST00000314759 DHRS7CA6NNS2 312 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 RHPN2P1A8MT19 583 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 RNF224P0DH78 156 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 RAB2AP61019 212 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 CLINT1Q14677 625 aa11.79□□□□□ -0.52
SKA3-202ENST00000314759 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms