RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 Q3ZCU0 254 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 BAP18Q8IXM2 172 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 BAHD1Q8TBE0 780 aaPredicted RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 FOXJ3Q9UPW0 622 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 JUNBP17275 347 aaPredicted RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 RAB5AP20339 215 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 COMPP49747 757 aaPredicted RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 CISD2Q8N5K1 135 aaKnown RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 OR4A4PQ8NGN8 299 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ADAP1O75689 374 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 BTG1P62324 171 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 PYCR3Q53H96 274 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 RIMKLAQ8IXN7 391 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 OR2T6Q8NHC8 308 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 BCL7CQ8WUZ0 217 aaPredicted RBP11.34□□□□□ -0.59
USP38-201ENST00000307017 FAM90A27PA6NNH2 459 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 KLRC4-KLRK1H3BQV0 150 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 CCL7P80098 99 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ADAMTSL4Q6UY14 1074 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 CCL17Q92583 94 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 ARRDC1-AS1Q9H2J1 176 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 LIPGQ9Y5X9 500 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 RGPD1P0DJD0 1748 aa11.34□□□□□ -0.59
USP38-201ENST00000307017 IGHV3OR15-7A0A075B7D8 119 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 IGKV3D-15A0A087WSY6 115 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 OR5K3A6NET4 321 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 AGFG2O95081 481 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 IGKV3-15P01624 115 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TAS2R60P59551 318 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ZBTB37Q5TC79 503 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 PTOV1Q86YD1 416 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 LYG1Q8N1E2 194 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ZG16BQ96DA0 208 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TLCD2A6NGC4 264 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 GFYI3L273 518 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 PPP1CAP62136 330 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 HLXQ14774 488 aaPredicted RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 ERRFI1Q9UJM3 462 aaPredicted RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 LSM2Q9Y333 95 aaKnown RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 LYZL6O75951 148 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 GPX2P18283 190 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ANKRD53Q8N9V6 530 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 EDAQ92838 391 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TRBV23-1A0A0A0MS06 115 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ACAA1P09110 424 aaPredicted RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 CDK5R1Q15078 307 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TMEM215Q68D42 235 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 OR1L3Q8NH93 324 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 GALMQ96C23 342 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 PAX5Q02548 391 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 MOB1BQ7L9L4 216 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 PRSS3P2Q8NHM4 247 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 OR2D2Q9H210 308 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 LPAR2Q9HBW0 351 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 ASPDHA6ND91 283 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 PPOXP50336 477 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 MRPL54Q6P161 138 aaKnown RBP11.33□□□□□ -0.6
USP38-201ENST00000307017 DGAT2L6Q6ZPD8 337 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 CAMKMTQ7Z624 323 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 GABARAPL1Q9H0R8 117 aa11.33□□□□□ -0.6
USP38-201ENST00000307017 MDC1Q14676 2089 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 KDM3BQ7LBC6 1761 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 ZNF25P17030 456 aaPredicted RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 WNT5AP41221 380 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ZNF154Q13106 437 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 CTF1Q16619 201 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 PRSS42Q7Z5A4 293 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 OR2G2Q8NGZ5 317 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 MMP17Q9ULZ9 603 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 MRPS2Q9Y399 296 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 CELA2BP08218 269 aaPredicted RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 GCSHP23434 173 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 APOBEC1P41238 236 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 MRGPRDQ8TDS7 321 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 BOD1Q96IK1 185 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 TRAF4Q9BUZ4 470 aaPredicted RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 A0A1W2PPE3 182 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 OR5B21A6NL26 309 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 EIF1BO60739 113 aaKnown RBP11.32□□□□□ -0.6
USP38-201ENST00000307017 PLAUP00749 431 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 ICAM2P13598 275 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 MMP9P14780 707 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 S100A7AQ86SG5 101 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 CACNA1CQ13936 2221 aa11.32□□□□□ -0.6
USP38-201ENST00000307017 COX5AP20674 150 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms