RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SEMA5BQ9P283 1151 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ELOA3CA0A087WX78 387 aaPredicted RBP9.68□□□□□ -0.86
LSM3-201ENST00000306024 ZNF878C9JN71 531 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 M0R143 59 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 SLC17A2O00624 439 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 GFRA3O60609 400 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 GLCEO94923 617 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 NID1P14543 1247 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 S1PR1P21453 382 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 PSG6Q00889 435 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 EXT1Q16394 746 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 KHDC3LQ587J8 217 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ETFRF1Q6IPR1 90 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ADGRE4PQ86SQ3 457 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OR5H2Q8NGV7 314 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 ADAMTS17Q8TE56 1095 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 TIMP4Q99727 224 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 WWTR1Q9GZV5 400 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 PARP11Q9NR21 331 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 OR5AC2Q9NZP5 309 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 KCNE5Q9UJ90 142 aa9.68□□□□□ -0.86
LSM3-201ENST00000306024 VCANP13611 3396 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 SERINC4A6NH21 518 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 RAB27BO00194 218 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TRGC2P03986 189 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 RPL29P47914 159 aaKnown RBP9.67□□□□□ -0.86
LSM3-201ENST00000306024 SLC26A5P58743 744 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 FUT7Q11130 342 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 FOXC1Q12948 553 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 OPN5Q6U736 354 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TMPRSS11FQ6ZWK6 438 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 RPS19BP1Q86WX3 136 aaKnown RBP9.67□□□□□ -0.86
LSM3-201ENST00000306024 GVQW1Q8N7I0 195 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ADAD2Q8NCV1 583 aaKnown RBP9.67□□□□□ -0.86
LSM3-201ENST00000306024 OR51F2Q8NH61 342 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TAAR8Q969N4 342 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 RAB39BQ96DA2 213 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 GFI1Q99684 422 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 CENPMQ9NSP4 180 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TMEM131Q92545 1883 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ZBTB25P24278 435 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 HAGHQ16775 308 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 UNQ9370/PRO34162Q6UXP9 181 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 VSTM2LQ96N03 204 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TWSG1Q9GZX9 223 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ZNF346Q9UL40 294 aaKnown RBP9.67□□□□□ -0.86
LSM3-201ENST00000306024 A0A1B0GTI1 187 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 MEGF11A6BM72 1044 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 SULT1A2P50226 295 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 CD81P60033 236 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 PRAMEF20Q5VT98 475 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 SPNS3Q6ZMD2 512 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ZNF440Q8IYI8 595 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ZDHHC22Q8N966 263 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 OR4C3Q8NH37 302 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 HAS2Q92819 552 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 LIN37Q96GY3 246 aaPredicted RBP9.67□□□□□ -0.86
LSM3-201ENST00000306024 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 ANKRD10Q9NXR5 420 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TCFL5Q9UL49 500 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 TIMM10BQ9Y5J6 103 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 EML5Q05BV3 1969 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 PLXND1Q9Y4D7 1925 aa9.67□□□□□ -0.86
LSM3-201ENST00000306024 A0A1B0GWJ7 208 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 C2orf72A6NCS6 295 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 F13BP05160 661 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 HCKP08631 526 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 ITGA5P08648 1049 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 COX5BP10606 129 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC37A1P57057 533 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 DUSP8Q13202 625 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC10A1Q14973 349 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 CEBPEQ15744 281 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 WDR88Q6ZMY6 472 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 TMEM182Q6ZP80 229 aaPredicted RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 OR51A4Q8NGJ6 313 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 C2orf50Q96LR7 162 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 TP53TG5Q9Y2B4 290 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 ZNF264O43296 627 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 OR2J2O76002 312 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 THY1P04216 161 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 MMP7P09237 267 aaPredicted RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 PGCP20142 388 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 CRABP1P29762 137 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC16A9Q7RTY1 509 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 CMBLQ96DG6 245 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
LSM3-201ENST00000306024 SOX7Q9BT81 388 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 C19orf12Q9NSK7 152 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 P4HTMQ9NXG6 502 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 OR14J1Q9UGF5 321 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 GAB2Q9UQC2 676 aa9.66□□□□□ -0.86
LSM3-201ENST00000306024 SLC22A13Q9Y226 551 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms