RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 IKZF1Q13422 519 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 TMED1Q13445 227 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ANGPTL6Q8NI99 470 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
HMGN3-201ENST00000275036 AQP3Q92482 292 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ITFG2Q969R8 447 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 WDFY2Q96P53 400 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 SLC29A1Q99808 456 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 S100A14Q9HCY8 104 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 GPR173Q9NS66 373 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 DNAJB11Q9UBS4 358 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 RPUSD1Q9UJJ7 312 aaKnown RBP11.91□□□□□ -0.5
HMGN3-201ENST00000275036 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 J3QRE1 110 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 TOX4O94842 621 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 HKR1P10072 659 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 GLRA1P23415 457 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 SNRPGP62308 76 aaKnown RBP11.9□□□□□ -0.5
HMGN3-201ENST00000275036 ARF6P62330 175 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 DGUOKQ16854 277 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 TP53I3Q53FA7 332 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 CLVS2Q5SYC1 327 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 HAGHLQ6PII5 290 aaPredicted RBP11.9□□□□□ -0.5
HMGN3-201ENST00000275036 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
HMGN3-201ENST00000275036 SLC36A1Q7Z2H8 476 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 PRSS35Q8N3Z0 413 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 PNLDC1Q8NA58 520 aaKnown RBP11.9□□□□□ -0.5
HMGN3-201ENST00000275036 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 RFKQ969G6 155 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 IMPAD1Q9NX62 359 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 NLKQ9UBE8 527 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 ORC6Q9Y5N6 252 aa11.9□□□□□ -0.5
HMGN3-201ENST00000275036 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 PQLC2LA1A4F0 135 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 OR2AT4A6NND4 320 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 NDUFB3O43676 98 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 SYNGR1O43759 233 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 SULT1C4O75897 302 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 ECDO95905 644 aaPredicted RBP11.89□□□□□ -0.51
HMGN3-201ENST00000275036 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
HMGN3-201ENST00000275036 GABRB1P18505 474 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 ATP6V1E1P36543 226 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 KIR3DL2P43630 455 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 MTNR1AP48039 350 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 OCLNQ16625 522 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 GPR157Q5UAW9 335 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 METTL11BQ5VVY1 283 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 CNTD2Q9H8S5 307 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 ACOXLQ9NUZ1 547 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 ZNF222Q9UK12 451 aa11.89□□□□□ -0.51
HMGN3-201ENST00000275036 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGN3-201ENST00000275036 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 CLDN34H7C241 214 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 DLGAP1O14490 977 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
HMGN3-201ENST00000275036 PSG2P11465 335 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 HAAOP46952 286 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 PQLC1Q8N2U9 271 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 LHX4Q969G2 390 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
HMGN3-201ENST00000275036 GNG8Q9UK08 70 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 MAB21L2Q9Y586 359 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 PCDHGB1Q9Y5G3 927 aa11.88□□□□□ -0.51
HMGN3-201ENST00000275036 PKD1L1Q8TDX9 2849 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 J3QT63 122 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-201ENST00000275036 SYT7O43581 403 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 PGA5P0DJD9 388 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 GABRA2P47869 451 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 DLX1P56177 255 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 IL13RA1P78552 427 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 PRB3Q04118 309 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-201ENST00000275036 UBE2V2Q15819 145 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 CDONQ4KMG0 1287 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 MEDAGQ5VYS4 303 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 CALHM1Q8IU99 346 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
HMGN3-201ENST00000275036 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms