RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 IFI6P09912 130 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 GABRA4P48169 554 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 PDCD1Q15116 288 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 RNF212Q495C1 297 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF529Q6P280 563 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 OR56B1Q8NGI3 324 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 PIGQQ9BRB3 760 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 NXT1Q9UKK6 140 aaKnown RBP11.37□□□□□ -0.59
COL8A1-202ENST00000273342 SRPK3Q9UPE1 567 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 SHANK1Q9Y566 2161 aa11.37□□□□□ -0.59
COL8A1-202ENST00000273342 SEMA4FO95754 770 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 IGHV2-5P01817 119 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 GSTP1P09211 210 aaKnown RBP11.36□□□□□ -0.59
COL8A1-202ENST00000273342 MYF5P13349 255 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 KLK2P20151 261 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 IL15RAQ13261 267 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
COL8A1-202ENST00000273342 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 URM1Q9BTM9 101 aaKnown RBP11.36□□□□□ -0.59
COL8A1-202ENST00000273342 WWTR1Q9GZV5 400 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 NKX2-4Q9H2Z4 354 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 C1orf123Q9NWV4 160 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
COL8A1-202ENST00000273342 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 TNFSF12O43508 249 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 IFNA21P01568 189 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 IGKV3-11P04433 115 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 TMEM225BP0DP42 221 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF17P17021 662 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 CCL20P78556 96 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 FZD2Q14332 565 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 C14orf28Q4W4Y0 310 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 OGFOD3Q6PK18 319 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 SGPP2Q8IWX5 399 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF383Q8NA42 475 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 TCTN2Q96GX1 697 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 GABRG3Q99928 467 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 CUTCQ9NTM9 273 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 LHFPL6Q9Y693 200 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 DMDP11532 3685 aa11.36□□□□□ -0.59
COL8A1-202ENST00000273342 FTCDNL1E5RQL4 147 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 MASP2O00187 686 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 TAAR5O14804 337 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 ANGPTL7O43827 346 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 TSPAN2O60636 221 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 DEDDO75618 318 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 RNF224P0DH78 156 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 LYL1P12980 280 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 FAHP16930 419 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 CLRN1P58418 232 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 SHHQ15465 462 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 TSC22D1Q15714 1073 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 HAGHQ16775 308 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 P4HA3Q7Z4N8 544 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 OR5L1Q8NGL2 311 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 SCGB3A2Q96PL1 93 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 S100A13Q99584 98 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 C19orf12Q9NSK7 152 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 COPS7AQ9UBW8 275 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 FCGR2AP12318 317 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 THBS4P35443 961 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 KISS1Q15726 138 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 DTX1Q86Y01 620 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 PIAS3Q9Y6X2 628 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF850A8MQ14 1090 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 HOXC4P09017 264 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 SFTPDP35247 375 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 DAP3P51398 398 aaKnown RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 PIGPP57054 158 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 FOXF1Q12946 379 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 ZNF239Q16600 458 aaKnown RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 ZFP62Q8NB50 900 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 OR52M1Q8NGK5 317 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 EMG1Q92979 244 aaKnown RBP11.35□□□□□ -0.59
COL8A1-202ENST00000273342 MR1Q95460 341 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 TCEAL7Q9BRU2 100 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 LRRC61Q9BV99 259 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 TWSG1Q9GZX9 223 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 LIME1Q9H400 295 aa11.35□□□□□ -0.59
COL8A1-202ENST00000273342 FAM186AA6NE01 2351 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 A6NIZ1 184 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 PRF1P14222 555 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 CTHP32929 405 aa11.34□□□□□ -0.59
COL8A1-202ENST00000273342 TNFRSF4P43489 277 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms