RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 GSN-AS1Q9NRJ2 163 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 ST6GALNAC2Q9UJ37 374 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PLXNB3Q9ULL4 1909 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 ATP5SQ99766 215 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 GPR84Q9NQS5 396 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 CBY3A6NI87 242 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PNLIPRP2P54317 469 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 AGERQ15109 404 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 DRD1P21728 446 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PTGER1P34995 402 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 RUNX3Q13761 415 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 FAM122AQ96E09 287 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 SERTAD4Q9NUC0 356 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 LRP12Q9Y561 859 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 FRG2CA6NGY1 282 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 MMP9P14780 707 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 MMP16P51512 607 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 COL5A1-AS1Q5SY13 56 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 RFLNAQ6ZTI6 216 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 ANGPTL4Q9BY76 406 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PBX4Q9BYU1 374 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 ULBP2Q9BZM5 246 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 VSX1Q9NZR4 365 aaPredicted RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 SLC31A2O15432 143 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 LNP1A1A4G5 178 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 PMS2P11Q13670 270 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 RTL8BQ17RB0 113 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 KIRREL2Q6UWL6 708 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 THSD4Q6ZMP0 1018 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 GLRX5Q86SX6 157 aa10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 MRM2Q9UI43 246 aaKnown RBP10.48□□□□□ -0.73
DNMT3A-201ENST00000264709 H0Y8G0 127 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 ZFAND5O76080 213 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 THBS4P35443 961 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 NAT6Q93015 286 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 TLNRD1Q9H1K6 362 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 NXT1Q9UKK6 140 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 GOLT1BQ9Y3E0 138 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 CD74P04233 296 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 YBX1P67809 324 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 OR2A1Q8NGT9 310 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 MRGPRX4Q96LA9 322 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 TRBV5-5A0A0J9YX44 114 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 VDAC1P21796 283 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 RAB32Q13637 225 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 SGCZQ96LD1 299 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 AGFG1P52594 562 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 HFEQ30201 348 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 C4orf17Q53FE4 359 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 ZNF793Q6ZN11 406 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 HSPB1P04792 205 aaKnown RBP10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 HOXA6P31267 233 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 ZNF90Q03938 601 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 EID2BQ96D98 161 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 RNF24Q9Y225 148 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 ADAP1O75689 374 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 CLDN15P56746 228 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 CLDN2P57739 230 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 SERF2P84101 59 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 NPEPL1Q8NDH3 523 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 OR8U1Q8NH10 309 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 TM7SF3Q9NS93 570 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 TBXA2RP21731 343 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 MACROD1Q9BQ69 325 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 LINC00597Q9H2U6 94 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 CALHM2Q9HA72 323 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 A6NCN8 305 aa10.47□□□□□ -0.73
DNMT3A-201ENST00000264709 WDR90Q96KV7 1748 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 SEMA4FO95754 770 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 MUC1P15941 1255 aaPredicted RBP10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 GALR1P47211 349 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 ATP6V1FQ16864 119 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 OR5C1Q8NGR4 320 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 C16orf52Q8NHV5 167 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 SARGQ9BW04 601 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 SLC17A4Q9Y2C5 497 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 CHEK1O14757 476 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 MPV17LQ2QL34 196 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 MRGPRGQ86SM5 289 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 TMEM131Q92545 1883 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 ZNF891A8MT65 544 aaPredicted RBP10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 PRKRAO75569 313 aaKnown RBP10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 IL3RAP26951 378 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 ZG16BQ96DA0 208 aa10.46□□□□□ -0.73
DNMT3A-201ENST00000264709 CIDEAO60543 219 aa10.46□□□□□ -0.74
DNMT3A-201ENST00000264709 OR10J1P30954 320 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms