RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 C1orf147Q96MC9 270 aaPredicted RBP16.08■□□□□ 0.17
TNFSF9-201ENST00000245817 C11orf54Q9H0W9 315 aaPredicted RBP16.08■□□□□ 0.17
TNFSF9-201ENST00000245817 OR10A4Q9H209 315 aa16.08■□□□□ 0.17
TNFSF9-201ENST00000245817 AUNIPQ9H7T9 357 aa16.08■□□□□ 0.17
TNFSF9-201ENST00000245817 KALRNO60229 2985 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 IGKV1-27A0A075B6S5 117 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 PLA2G10O15496 165 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 LYRM1O43325 122 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 SPRY1O43609 319 aaPredicted RBP16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 GDNFP39905 211 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 CRIP3Q6Q6R5 217 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 TMEM104Q8NE00 496 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 OR56B1Q8NGI3 324 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 OR10K1Q8NGX5 313 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 OR8S1Q8NH09 359 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 ENKURQ8TC29 256 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 KLF14Q8TD94 323 aaPredicted RBP16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 GCDHQ92947 438 aaPredicted RBP16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 RNF170Q96K19 258 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 COQ3Q9NZJ6 369 aa16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 NOP16Q9Y3C1 178 aaKnown RBP16.08■□□□□ 0.16
TNFSF9-201ENST00000245817 RP1L1Q8IWN7 2480 aaPredicted RBP16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 ZNF732B4DXR9 585 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 ORC5O43913 435 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 RBBP9O75884 186 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 HTR3BO95264 441 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 CYB5AP00167 134 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 MGMTP16455 207 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 CALCRP30988 508 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 GPM6AP51674 278 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 PDZK1IP1Q13113 114 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 NRARPQ7Z6K4 114 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 OR10R2Q8NGX6 335 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 ITPKCQ96DU7 683 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 MARS2Q96GW9 593 aaKnown RBP16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 NUDT16L1Q9BRJ7 211 aaKnown RBP16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 LPAR5Q9H1C0 372 aa16.07■□□□□ 0.16
TNFSF9-201ENST00000245817 PQLC2LA1A4F0 135 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 IQCF6A8MYZ5 107 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 RAB27BO00194 218 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 ANGPTL7O43827 346 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 PRB1P04280 392 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 PTHLHP12272 177 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 CA6P23280 308 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 SRP9P49458 86 aaKnown RBP16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 RPS27AP62979 156 aaKnown RBP16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 MOGAT2Q3SYC2 334 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 PXT1Q8NFP0 134 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 OR51F2Q8NH61 342 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 OR5P3Q8WZ94 311 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 MICU1Q9BPX6 476 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 SELENOIQ9C0D9 397 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 CACNG2Q9Y698 323 aa16.06■□□□□ 0.16
TNFSF9-201ENST00000245817 A0A1W2PP11 408 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 OR5B21A6NL26 309 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 B8ZZF3 427 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 SULT1C2O00338 296 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 GTF2F2P13984 249 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CPT2P23786 658 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 HAAOP46952 286 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 GNG3P63215 75 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 PSG7Q13046 419 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CDNFQ49AH0 187 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CCBE1Q6UXH8 406 aaPredicted RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ZNF611Q8N823 705 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ZSCAN4Q8NAM6 433 aaPredicted RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 HPSE2Q8WWQ2 592 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 RTL8AQ9BWD3 113 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 SCPEP1Q9HB40 452 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 RBFOX1Q9NWB1 397 aaKnown RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 TAS2R8Q9NYW2 309 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 NPAP1Q9NZP6 1156 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 KLK11Q9UBX7 282 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 FAM240BA0A1B0GVZ2 78 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 TIMM8AO60220 97 aaPredicted RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 PPP3CBP16298 524 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CHRNB4P30926 498 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ASCL1P50553 236 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 FABP6P51161 128 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 RGS7BPQ6MZT1 257 aaPredicted RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ASCL4Q6XD76 172 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ZNF573Q86YE8 665 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 RAB3CQ96E17 227 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 NICN1Q9BSH3 213 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 ZMAT3Q9HA38 289 aaKnown RBP16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CRIM1Q9NZV1 1036 aa16.05■□□□□ 0.16
TNFSF9-201ENST00000245817 CHD6Q8TD26 2715 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 MEIOCA2RUB1 952 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 LILRA1O75019 489 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 CCKARP32238 428 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 MPV17P39210 176 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 RFX2P48378 723 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 SNTB2Q13425 540 aaKnown RBP16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 DYRK1AQ13627 763 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 ZNF260Q3ZCT1 412 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 MBNL2Q5VZF2 373 aaKnown RBP16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 TMEM108Q6UXF1 575 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 Q6ZTK2 550 aa16.04■□□□□ 0.16
TNFSF9-201ENST00000245817 SLC25A26Q70HW3 274 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms