RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PEX14O75381 377 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PTGFRP43088 359 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 CNN3Q15417 329 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 MOGAT2Q3SYC2 334 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 MRPL21Q7Z2W9 205 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TMEM104Q8NE00 496 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 DEDD2Q8WXF8 326 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 HYLS1Q96M11 299 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR10A4Q9H209 315 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 OR51B6Q9H340 312 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PTTG3PQ9NZH4 202 aa16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SMG1Q96Q15 3661 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-201ENST00000162749 TRAV18A0A075B6X5 111 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SULT1A3P0DMM9 295 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 SULT1A4P0DMN0 295 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 NAT2P11245 290 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZBTB37Q5TC79 503 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 C1QL2Q7Z5L3 287 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 LILRB4Q8NHJ6 448 aa16.96■□□□□ 0.31
TNFRSF1A-201ENST00000162749 ZNF780AO75290 641 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CBR1P16152 277 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ALDH3B1P43353 468 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 VEGFCP49767 419 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 BHLHA15Q7RTS1 189 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 C9orf62Q8N4C0 152 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 C1QTNF6Q9BXI9 259 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 KCNN3Q9UGI6 736 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 HSPB11Q9Y547 144 aa16.96■□□□□ 0.3
TNFRSF1A-201ENST00000162749 IGKV1-27A0A075B6S5 117 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A0A0A6YYH2 397 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A0A1W2PP11 408 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 METTL21EPA6NDL7 271 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A6NJ64 397 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 H7C417 338 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RAB27BO00194 218 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ICMTO60725 284 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 AGFG2O95081 481 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MTCP1P56278 107 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR2W3Q7Z3T1 314 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ACBD4Q8NC06 268 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PIGCQ92535 297 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OPA3Q9H6K4 179 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MTFP1Q9UDX5 166 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PLCE1Q9P212 2302 aa16.95■□□□□ 0.3
TNFRSF1A-201ENST00000162749 FAM230AA0A1W2PPH8 454 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR5H1A6NKK0 313 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 UBBP0CG47 229 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ANXA3P12429 323 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PRKACBP22694 351 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZP1P60852 638 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 Q6ZTK2 550 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR11H4Q8NGC9 324 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 KCNG3Q8TAE7 436 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 TNFAIP8L1Q8WVP5 186 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 J3QW42 95 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ARPC1BO15143 372 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RBP2P50120 134 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 GUCA2AQ02747 115 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MRPL49Q13405 166 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SLC22A6Q4U2R8 563 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SEZ6L2Q6UXD5 910 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OR5L1Q8NGL2 311 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 DACT3Q96B18 629 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 BORCS8Q96FH0 119 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 WBP1Q96G27 269 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CDH20Q9HBT6 801 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CRIM1Q9NZV1 1036 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SH3BGRL2Q9UJC5 107 aa16.94■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MEIKINA0A087WXM9 373 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CDC14BO60729 498 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SMPD2O60906 423 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 BMP5P22003 454 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 KLRB1Q12918 225 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PLCXD3Q63HM9 321 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CDH24Q86UP0 819 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 TECTBQ96PL2 329 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 PAPOLGQ9BWT3 736 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 LPAR5Q9H1C0 372 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OBP2BQ9NPH6 170 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 GHRLQ9UBU3 117 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ING4Q9UNL4 249 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 A0A0G2JNJ9 132 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 WIPF3A6NGB9 483 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZNF850A8MQ14 1090 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RBBP9O75884 186 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RAB12Q6IQ22 244 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 LHFPL2Q6ZUX7 228 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 NICN1Q9BSH3 213 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 TMEM59Q9BXS4 323 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 BANF2Q9H503 90 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 ZMAT3Q9HA38 289 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 Q9UFV3 132 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 GPR160Q9UJ42 338 aa16.93■□□□□ 0.3
TNFRSF1A-201ENST00000162749 CD300LBA8K4G0 201 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 SSNA1O43805 119 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 MPIG6BO95866 241 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 OPRM1P35372 400 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 RAD52P43351 418 aa16.92■□□□□ 0.3
TNFRSF1A-201ENST00000162749 FUT6P51993 359 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms