RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Olfr598Q7TRR2 319 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fam214bQ8BR27 538 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tox4Q8BU11 619 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Lrtm1Q8BXQ3 356 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Mettl21eQ8CDZ2 244 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ear6Q923L7 155 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tmem216Q9CQC4 141 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Htra1Q9R118 480 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tex38A2A8T7 201 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Adamts3E9Q287 1204 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm10097J3KMK7 105 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tmem104Q3TB48 496 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ranbp3lQ6PDH4 491 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Sh2d7Q8BI17 458 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Taf15Q8BQ46 557 aaKnown RBP18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tgm4Q8BZH1 670 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Defb21Q8C5Z4 100 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Las2Q8CB14 526 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr1491Q8VEZ5 319 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gatad2bQ8VHR5 594 aaKnown RBP18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 3100002H09RikQ9CXW6 140 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Alkbh4Q9D8F1 300 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 GltpQ9JL62 209 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Clec4eQ9R0Q8 214 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 NpffQ9WVA8 114 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Celsr3Q91ZI0 3301 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Selenbp1P17563 472 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Bcl2l2P70345 193 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ceacam19Q3TQ88 271 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 GfralQ6SJE0 393 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Uhrf2Q7TMI3 803 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fam57bQ7TNV1 275 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Lmntd1Q9D4C1 413 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Mmp1bQ9EPL6 463 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Lrrk2Q5S006 2527 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ubr5Q80TP3 2792 aa18.53■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pira2F8VQ94 680 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Vmn2r47K7N709 852 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm21750L7N228 499 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Chrnb1P09690 501 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Zfp27P10077 819 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 B3gnt6Q3USF0 391 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 CrhbpQ60571 322 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Sez6Q7TSK2 991 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Commd2Q8BXC6 199 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 TigarQ8BZA9 269 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr1217Q8VGG1 304 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pla1aQ8VI78 456 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Park7Q99LX0 189 aaKnown RBP18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 4930447A16RikQ9D5F6 132 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Copz2Q9JHH9 205 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 HraslsQ9QZU4 167 aa18.52■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ccdc9bA3KGF9 545 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cnih2O35089 160 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Brd7O88665 651 aaKnown RBP18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 P2rx1P51576 399 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc12a3P59158 1002 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Wfdc18P62810 74 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Slc7a10P63115 530 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Foxg1Q60987 481 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rab39aQ8BHD0 217 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cyp51a1Q8K0C4 503 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr1330Q8VEY6 315 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Pcdhga3Q91XY5 928 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cisd2Q9CQB5 135 aaKnown RBP18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Cmtm2aQ9DAR1 169 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Kcnmb4Q9JIN6 210 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Rspo1Q9Z132 265 aa18.52■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Sptbn2Q68FG2 2388 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Zzef1Q5SSH7 2924 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f15A0A087WR44 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f12A0A0A0MQP3 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm13083A2AGW5 501 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f9A2BFZ7 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f7A2BHG6 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f19A2CG71 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f10A2CG92 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f3A2CGC2 496 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f13B8JKF6 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm8127E9Q0P0 100 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr424E9Q0Q2 315 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Olfr430E9Q5F1 317 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f2J3QMS5 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f25J3QMV9 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f6J3QMW9 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f26J3QNK2 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f24J3QNQ5 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f8J3QQ50 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm8094K7N6U8 211 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f17L7MU81 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f18L7MU83 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 MgllO35678 303 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 P01800 113 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 HckP08103 524 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Csn1s1P19228 313 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Efna2P52801 209 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f14Q1LZI5 498 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 A230072I06RikQ3UUJ8 172 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Gm1527Q3V0P3 650 aa18.51■□□□□ 0.55
Ccdc88a-202ENSMUST00000109477 Btbd35f27Q5FWA1 498 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms