RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Eif1aQ60872 144 aaKnown RBP15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Eif1axQ8BMJ3 144 aaKnown RBP15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Rrnad1Q8BZG5 475 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Rdh1Q8CGV4 317 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr1301Q8VGE7 312 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Arrdc1Q99KN1 434 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Rrp8Q9DB85 457 aaKnown RBP15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Slco1b2Q9JJL3 689 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Vps13aQ5H8C4 3166 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr1113Q7TR54 326 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 QdprQ8BVI4 241 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Dcun1d4Q8CCA0 292 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Rasgef1bQ8JZL7 473 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Asb10Q91ZT7 467 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Bhlhe41Q99PV5 410 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Myoz1Q9JK37 296 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Klk1b9P15949 261 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Il13P20109 131 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Id4P41139 161 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Rnf180Q3U827 592 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Slc16a11Q5NC32 447 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr1135Q7TR42 310 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr187Q8VEX6 308 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr994Q8VF73 314 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Rbm39Q8VH51 530 aaKnown RBP15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Mrpl18Q9CQL5 180 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 2900055J20RikQ9D6G3 140 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 MokQ9WVS4 420 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Mki67E9PVX6 3177 aaKnown RBP15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm498D3YYH9 372 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 5430401F13RikE9Q328 175 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Arf3P61205 181 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Has2P70312 552 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Lyg2Q3V1I0 213 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm12258Q5NC63 627 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Abhd13Q80UX8 337 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Lrp12Q8BUJ9 858 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Synpo2lQ8BWB1 975 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Il34Q8R1R4 235 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr836Q8VFJ3 317 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Ear6Q923L7 155 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Trp53tg5Q9D976 238 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Sdf2Q9DCT5 211 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Fzd2Q9JIP6 570 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 Pde7bQ9QXQ1 446 aa15.04■□□□□ -0
Ctcf-201ENSMUST00000005841 P01800 113 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Cyb5aP56395 134 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 MestQ07646 335 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 4930512M02RikQ5SQK8 218 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Rrm2bQ6PEE3 351 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 St6gal2Q76K27 524 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr201Q7TS38 308 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Znf436Q8BPP0 452 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Fam169bQ8CHT6 337 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Tmem144Q8VEH0 348 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr969Q8VG89 311 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Med6Q921D4 246 aaKnown RBP15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Fbxo36Q9CQ24 188 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 MeiobQ9D513 470 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 FastkQ9JIX9 511 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 SncgQ9Z0F7 123 aaKnown RBP15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm29276A0A087WNW5 222 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm20792A0A087WRF5 222 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm28490A0A087WRT9 222 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm21996A0A087WSS9 222 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Ighv1-43A0A0A6YXN5 117 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Vmn2r82G3UWA2 865 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Camk2bP28652 542 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 CelQ64285 599 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Avl9Q80U56 649 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Hbq1aQ8BYM1 145 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Rnf113a1Q8R3P8 341 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 CthQ8VCN5 398 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr1450Q8VF19 325 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 MpiQ924M7 423 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 9230104L09RikQ9D264 133 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Arl5bQ9D4P0 179 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 MioxQ9QXN5 285 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Vmn2r107E9PZJ7 861 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 OtpO09113 325 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Mbl2P41317 244 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Slc45a2P58355 530 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Msto1Q2YDW2 556 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 2410002F23RikQ3TE80 284 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Commd1Q8K4M5 188 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Olfr307Q8VFN8 313 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Tmem205Q91XE8 189 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Q9CRC3 126 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Clec1bQ9JL99 229 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 ClnkQ9QZE2 435 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Mfap5Q9QZJ6 164 aa15.03■□□□□ -0
Ctcf-201ENSMUST00000005841 Vmn1r5B2RQT2 315 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Mrap2D3Z1Q2 207 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm8356J3QPD3 205 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 NodalP43021 354 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Mtmr11Q3V1L6 700 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 A3galt2Q3V1N9 370 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Tmem171Q4KL18 322 aa15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Vdac3Q60931 283 aaKnown RBP15.02■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm5662Q8BX20 144 aa15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms