RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SERPINB10P48595 397 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 POU3F4P49335 361 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 MTCP1P56278 107 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 BLMHQ13867 455 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 USP43Q70EL4 1123 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 PEG10Q86TG7 708 aaKnown RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 DTX2Q86UW9 622 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 NEU4Q8WWR8 484 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 DVL3Q92997 716 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 RNF166Q96A37 237 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 OR2V2Q96R30 315 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 BCL7BQ9BQE9 202 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 TRAF4Q9BUZ4 470 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 BARX1Q9HBU1 254 aaPredicted RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 PCDHB16Q9NRJ7 776 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 TXNL4BQ9NX01 149 aaKnown RBP11.05□□□□□ -0.64
PHGDH-218ENST00000641491 IL19Q9UHD0 177 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 APCP25054 2843 aa11.05□□□□□ -0.64
PHGDH-218ENST00000641491 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 TRBV5-7A0A0A0MS05 114 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 FAM221AA4D161 298 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ZSCAN5BA6NJL1 495 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 F5H5P2 479 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 IFNL4K9M1U5 179 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 LMX1BO60663 402 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 SOD3P08294 240 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 RAB3BP20337 219 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ANOS1P23352 680 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 FGF9P31371 208 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 SOX6P35712 828 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ZNF93P35789 620 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 MAGEB1P43366 347 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 MMP15P51511 669 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 TMBIM6P55061 237 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 RPS11P62280 158 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 CARTPTQ16568 116 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 FIP1L1Q6UN15 594 aaKnown RBP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ANKRD13BQ86YJ7 626 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 C1orf87Q8N0U7 546 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 CELF2-AS1Q8N7Q2 184 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 DNAAF1Q8NEP3 725 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ZNF420Q8TAQ5 688 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 OR5P3Q8WZ94 311 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 TMIGD2Q96BF3 282 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 SORCS2Q96PQ0 1159 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 BATF3Q9NR55 127 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 SF3B6Q9Y3B4 125 aaKnown RBP11.04□□□□□ -0.64
PHGDH-218ENST00000641491 MTORP42345 2549 aa11.04□□□□□ -0.64
PHGDH-218ENST00000641491 ADGRG4Q8IZF6 3080 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 SLC22A1O15245 554 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 PLATP00750 562 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CDKN1AP38936 164 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CD200P41217 278 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CRYBB2P43320 205 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 HAAOP46952 286 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 MTNR1BP49286 362 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CAPZA1P52907 286 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CCL8P80075 99 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 INSL4Q14641 139 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 HFEQ30201 348 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CD200R1LQ6Q8B3 271 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 Q6ZSR3 168 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 ZNF671Q8TAW3 534 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 UBASH3BQ8TF42 649 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 MEGF10Q96KG7 1140 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
PHGDH-218ENST00000641491 PPP1R3CQ9UQK1 317 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 HIVEP1P15822 2718 aa11.03□□□□□ -0.64
PHGDH-218ENST00000641491 TRAV1-2A0A0B4J238 106 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 H7C417 338 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 GPX5O75715 221 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 ALX3O95076 343 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 GABARAPO95166 117 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 CDRT1O95170 752 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 DANCRP0C864 163 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 TMEM225BP0DP42 221 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 VBP1P61758 197 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 MXD1Q05195 221 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 RAB11BQ15907 218 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 MSMPQ1L6U9 139 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 FAM27D1Q5T7N8 215 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 TMEM42Q69YG0 159 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 AWAT2Q6E213 333 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.65
PHGDH-218ENST00000641491 UNQ9370/PRO34162Q6UXP9 181 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 TMEM91Q6ZNR0 172 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
PHGDH-218ENST00000641491 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms