RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GTPBP8Q8N3Z3 284 aaPredicted RBP13.6□□□□□ -0.23
CLN8-209ENST00000635970 PRR7Q8TB68 274 aa13.6□□□□□ -0.23
CLN8-209ENST00000635970 NUDT16L1Q9BRJ7 211 aaKnown RBP13.6□□□□□ -0.23
CLN8-209ENST00000635970 BIN3Q9NQY0 253 aa13.6□□□□□ -0.23
CLN8-209ENST00000635970 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
CLN8-209ENST00000635970 TINAGQ9UJW2 476 aa13.6□□□□□ -0.23
CLN8-209ENST00000635970 RAB22AQ9UL26 194 aa13.6□□□□□ -0.23
CLN8-209ENST00000635970 OSGIN2Q9Y236 505 aa13.6□□□□□ -0.23
CLN8-209ENST00000635970 FLNCQ14315 2725 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 TRBV6-7A0A0A0MS04 114 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 C9orf170A2RU37 121 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 M0QYG6 137 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 AQP7O14520 342 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 OR6A2O95222 327 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 SNAPINO95295 136 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 ABOP16442 354 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 IL13RA1P78552 427 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 RAET1LQ5VY80 246 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 CATSPERDQ86XM0 798 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 PLPP7Q8NBV4 271 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 SLC30A7Q8NEW0 376 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 AQP3Q92482 292 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 ZNF75AQ96N20 296 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 LAT2Q9GZY6 243 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 IFT22Q9H7X7 185 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 HHLA2Q9UM44 414 aa13.59□□□□□ -0.23
CLN8-209ENST00000635970 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 PRSS37A4D1T9 235 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 HEXAP06865 529 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 CD79AP11912 226 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 PVALBP20472 110 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 MSX1P28360 303 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 BDKRB2P30411 391 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 CX3CR1P49238 355 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 RAB13P51153 203 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ZNF41P51814 821 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 GFRA1P56159 465 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 TAS2R31P59538 309 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ODF4Q2M2E3 257 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 SCGB2B2Q4G0G5 96 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ASPHD2Q6ICH7 369 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 IL34Q6ZMJ4 242 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ZNF704Q6ZNC4 412 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 CD163Q86VB7 1156 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 OR5AP2Q8NGF4 316 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 OR1S2Q8NGQ3 325 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ZNF563Q8TA94 476 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 KTI12Q96EK9 354 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 PIK3IP1Q96FE7 263 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 SLC25A44Q96H78 314 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 SLC6A7Q99884 636 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 SEC11CQ9BY50 192 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 NMES1Q9C002 83 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 VSX1Q9NZR4 365 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 MYO18BQ8IUG5 2567 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 KIAA1549Q9HCM3 1950 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 HIVEP3Q5T1R4 2406 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 TRAV36DV7A0A075B6V5 113 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 H7C1C5 153 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 PSMB6P28072 239 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ATP1B3P54709 279 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 LCN6P62502 163 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 RBPJQ06330 500 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 C1QL3Q5VWW1 255 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 DRAM2Q6UX65 266 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 MAMDC2Q7Z304 686 aaPredicted RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 PUSL1Q8N0Z8 303 aaKnown RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 OR1M1Q8NGA1 313 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 GPR119Q8TDV5 335 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 TAAR8Q969N4 342 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 AMELYQ99218 206 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 VSIG4Q9Y279 399 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 ZNF835Q9Y2P0 537 aa13.58□□□□□ -0.24
CLN8-209ENST00000635970 MRPS18CQ9Y3D5 142 aaKnown RBP13.58□□□□□ -0.24
CLN8-209ENST00000635970 POLEQ07864 2286 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 ZNF208O43345 1280 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 RPL27P61353 136 aaKnown RBP13.57□□□□□ -0.24
CLN8-209ENST00000635970 FOXF1Q12946 379 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 AWAT2Q6E213 333 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 LDLRAD3Q86YD5 345 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 SKA3Q8IX90 412 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 FAM57AQ8TBR7 257 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 MMP26Q9NRE1 261 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 SLC22A13Q9Y226 551 aa13.57□□□□□ -0.24
CLN8-209ENST00000635970 HELZ2Q9BYK8 2649 aaKnown RBP13.56□□□□□ -0.24
CLN8-209ENST00000635970 TRGV8A0A0C4DH27 118 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 PNPP00491 289 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 IGHMP01871 453 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 BGLAPP02818 100 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 SUMO3P55854 103 aaPredicted RBP13.56□□□□□ -0.24
CLN8-209ENST00000635970 TSC22D1Q15714 1073 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 SGCBQ16585 318 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 ZNF260Q3ZCT1 412 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 CDNFQ49AH0 187 aa13.56□□□□□ -0.24
CLN8-209ENST00000635970 NKAPLQ5M9Q1 402 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms