RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
LIMS4-204ENST00000632897 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 SLC22A6Q4U2R8 563 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 HIKESHIQ53FT3 197 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 STEAP1BQ6NZ63 245 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 Q6ZT83 130 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 TCTE3Q8IZS6 198 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
LIMS4-204ENST00000632897 OR5M9Q8NGP3 310 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 BOD1Q96IK1 185 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 REPIN1Q9BWE0 567 aaKnown RBP12.33□□□□□ -0.44
LIMS4-204ENST00000632897 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
LIMS4-204ENST00000632897 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 J3QW42 95 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 CD74P04233 296 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 HIST1H1DP16402 221 aaKnown RBP12.32□□□□□ -0.44
LIMS4-204ENST00000632897 IGHV1-2P23083 117 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 MEF2DQ14814 521 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 ARL6IP1Q15041 203 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 LINC00303Q3SY05 128 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 ASCL4Q6XD76 172 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
LIMS4-204ENST00000632897 MRPL21Q7Z2W9 205 aaKnown RBP12.32□□□□□ -0.44
LIMS4-204ENST00000632897 TRAPPC6BQ86SZ2 158 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 C9orf106Q8NAJ2 232 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 C1orf162Q8NEQ5 155 aaPredicted RBP12.32□□□□□ -0.44
LIMS4-204ENST00000632897 CSNK2A3Q8NEV1 391 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 CMBLQ96DG6 245 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 RAB3CQ96E17 227 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 RNF170Q96K19 258 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 GPR137Q96N19 417 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 SELENOIQ9C0D9 397 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 METTL9Q9H1A3 318 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 MED28Q9H204 178 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 BANF2Q9H503 90 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.32□□□□□ -0.44
LIMS4-204ENST00000632897 ING3Q9NXR8 418 aa12.32□□□□□ -0.44
LIMS4-204ENST00000632897 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 A0A1B0GUH1 482 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 MEIS3P1A6NDR6 274 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ZNF736B4DX44 427 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ICMTO60725 284 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ZNF780AO75290 641 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 WISP2O76076 250 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 RAB3DO95716 219 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 PDGFAP04085 211 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 CD3DP04234 171 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 MGMTP16455 207 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 TBPP20226 339 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 COX5AP20674 150 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 CCNOP22674 350 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 CPT2P23786 658 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 PTGER4P35408 488 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 KIR2DL2P43627 348 aaPredicted RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ATP1B3P54709 279 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ZFP69Q49AA0 526 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 METTL11BQ5VVY1 283 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 MDP1Q86V88 176 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 GCNT2Q8N0V5 402 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 FTMTQ8N4E7 242 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 OR5D18Q8NGL1 313 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 GIMAP1Q8WWP7 306 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 MED30Q96HR3 178 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ZMAT3Q9HA38 289 aaKnown RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 MOV10Q9HCE1 1003 aaKnown RBP12.31□□□□□ -0.44
LIMS4-204ENST00000632897 NKIRAS2Q9NYR9 191 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 ANAPC10Q9UM13 185 aa12.31□□□□□ -0.44
LIMS4-204ENST00000632897 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 FAM230AA0A1W2PPH8 454 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MBD3L4A6NDZ8 208 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MBD3L3A6NE82 208 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MBD3L5A6NJ08 208 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 FOXI3A8MTJ6 420 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MFNGO00587 321 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 ARPC1BO15143 372 aaKnown RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 CA11O75493 328 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 CST4P01036 141 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 IL5P05113 134 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 CRHP06850 196 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 TMEM225BP0DP42 221 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 GNB3P16520 340 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MPZP25189 248 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 CBX5P45973 191 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 GNG2P59768 71 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 GK2Q14410 553 aaPredicted RBP12.3□□□□□ -0.44
LIMS4-204ENST00000632897 PPA1Q15181 289 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 ZMYND11Q15326 602 aa12.3□□□□□ -0.44
LIMS4-204ENST00000632897 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms